circular BCT 25-OCT-2007
DEFINITION
Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete
CP000530 AANM AANM-AANM
Project: 13418
Polaromonas naphthalenivorans CJ2
Polaromonas naphthalenivorans CJ2
C Polaromonas.
(bases 1 to 353291)
Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D.R., Brettin,T., Bruce,D., Han,C., Tapia,R., Brainard,J.,
Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E.,
Madsen,E.L. and Richardson,P.
US DOE Joint Genome Institute
Complete sequence of plasmid pPNAP01 of Polaromonas
naphthalenivorans CJ2
Unpublished
(bases 1 to 353291)
Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D.R., Brettin,T., Bruce,D., Han,C., Tapia,R., Brainard,J.,
Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E.,
Madsen,E.L. and Richardson,P.
US DOE Joint Genome Institute
Direct Submission
Submitted (21-DEC-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA , USA
URL -- http://www.jgi.doe.gov
JGI Project ID: 4000361
Source DNA and bacteria available from Eugene L. Madsen
(elm3@cornell.edu)
Contacts: Eugene L. Madsen (elm3@cornell.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=).
Location/Qualifiers
/organism="Polaromonas naphthalenivorans CJ2"
/mol_type="genomic DNA"
/strain="CJ2"
/db_xref="taxon:365044"
/plasmid="pPNAP01"
complement(<1..198)
/locus_tag="Pnap_4122"
complement(483..1040)
/locus_tag="Pnap_4123"
complement(483..1040)
/locus_tag="Pnap_4123"
/note="PFAM: Resolvase, N- Resolvase
helix-turn-
KEGG: rru:Rru_B0010 resolvase"
/codon_start=1
/transl_table=11
/product="Resolvase, N-terminal domain"
/protein_id="ABM39412.1"
/db_xref="GI:"
/db_xref="InterPro:IPR006118"
/db_xref="InterPro:IPR006119"
/db_xref="InterPro:IPR006120"
/translation="MLIGYARVSTLDQHLDLQMDALTQAGCHRLFDDKMSGSRAERPG
LAKALDMLREGDTLVVWKLDRLGRSVKRLVDLVGQLHRQGVHLKSLTDAIDTGTPSGR
FFFHVMTSLAEMERELTAERTRAGLEVARQLGRKGGRKRKMTDSKIASAKKLLASGVP
PRDVAKNLGVSVPTLYRWIPASSQA"
/locus_tag="Pnap_4124"
/locus_tag="Pnap_4124"
/note="KEGG: rme:Rmet_6179 transposase Tn3"
/codon_start=1
/transl_table=11
/product="transposase Tn3"
/protein_id="ABM39413.1"
/db_xref="GI:"
/translation="MPRRSILSAAERDSLLALPATQDELIRHYTLSETDLSIIRLHRK
PANRLGFAVQLCYMRHPGLAGANEWRCCINPRDGAPSPWPPIFRRSGRSSGVRAQSCG
complement()
/locus_tag="Pnap_4125"
complement()
/locus_tag="Pnap_4125"
/note="PFAM: transposase, IS4
KEGG: bte:BTH_II0087 transposase"
/codon_start=1
/transl_table=11
/product="transposase, IS4 family protein"
/protein_id="ABM39414.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002559"
/translation="MPKDTLLPSQPKGVYRVKNWPEYNAGLIERGNVTVWMDERMFSP
ALQTPGQRGRPQAYCDAMIQMLLTLKSVYRLPLRALQGFTTSLQHLALPGLPVPNYST
LSRRAKSLRVSLPVLRNAGEAVHLLVDSTGLKLFGEGEWKVRQHGYSKRRSWRKVHLA
LDAKTAQVCAVLMTHRDVDDASVLPELLAQLPPQTQVEIVGGDGAYDTKVARAAIAGC
AALALIPPVEGAVHWPASQAGAPERNAAIDHIAQSGKQDWKDKSGYHCRSLVENLMYR
FKTLTGDRLWARDVDVQDAEVAVRVGILNRMIVLARPNSVRIA"
complement()
/locus_tag="Pnap_4126"
complement()
/locus_tag="Pnap_4126"
/note="PFAM: me
KEGG: serine/threonine protein phosphatase, putative"
/codon_start=1
/transl_table=11
/product="metallophosphoesterase"
/protein_id="ABM39415.1"
/db_xref="GI:"
/db_xref="InterPro:IPR004843"
/translation="MNDKFKNIAIPRFSLNLVGRDFAVGDIHGCFRALQKGMDAIGFD
PAVDRLFSVGDLVDRGPESHQVLAWLDQPWFHAVCGNHDLMAWRRALGEPFQEVDHLF
HGGEWLDDLSSDELNRIGKRLAALPIALEVKTSAGIVGLMHADCPFDDWQHMHGIDLK
GLAKMGSTAGRCLWSADRHDYRYTGIVKNILAVVHGHRTISAMMKLGNVFFIDTGGWT
RTGHFTFLNLQTLKPLRGPGTEISAVIPSRRNR"
complement()
/locus_tag="Pnap_4127"
complement()
/locus_tag="Pnap_4127"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39416.1"
/db_xref="GI:"
/translation="MTSLLYHSNGSDANSSPFDDAVLQVAQGSIIKIVSPYIGLRYLQ
RIIEASIGWTLVSDIEAWLSFLSSSERARTLPFIHANLEKIHHCSAIHAKTVISPTLA
YLGSANLTITGILNRTEMGVLLEDPRLVTELNDWFDGVWTQTEPPDTAEITEFADWLD
QQALTAAAGPPKKSLSSAGQRVAARLTNRPNLGVGPVAIITAKPVKQQQKVPAPVATF
DIYDPGVVISLVDTLVVKGFGFQAFVQAAHRQSVSVAQRDLYFALLLFCANHPRSIFA
ADTLNRLLFINGVFVQSTPEQLKLQQKPYDEYLSSLILALAFDEARLLPSSAQLQKAT
GLREARQRLLISSLVESGLLQPRKDTGNSPVRYALKSDFIWSRRFQLFSKAYKNWTKC
LSRSAADNTALRISAAKESDDAPAAVQPIESWPFVINKKIAVKPESPSHAMENDDAPV
LAAARSVKPDPANFAPPEPHSESLQSKAIRIIRPSDHTALIWAIEPIFSSEADRIDEL
YLHLAKILEPSTGFFNFKSIKAFVMYVYAHYREDKEFIEQVLIGNINKTRLFYITIGL
EKMNICCKVELNLDADMNEYPKTYKFMKKSAEVLKRNLLNKKNGLILLKYNRGFFART
VGYKALAQCDPQRKSAAIKRENALRRTALAKEDEAKQKTLAERQAYLDDGTVKAIKEA
YARLDRADQVFESLLFLVQLYGNQLPLETEIEVFKKISDRTNIRIKEVERIFKNETNP
FTLSILKASGDDTETCCLIQLNHSYSGNLEVLPRTKKLLDMASLN"
complement()
/locus_tag="Pnap_4128"
complement()
/locus_tag="Pnap_4128"
/note="PFAM: HipA
KEGG: pol:Bpro_1566 HipA-like"
/codon_start=1
/transl_table=11
/product="HipA domain protein"
/protein_id="ABM39417.1"
/db_xref="GI:"
/db_xref="InterPro:IPR012893"
/db_xref="InterPro:IPR012894"
/translation="MKTPVWTWLPGSSEPTLAGTLAADAGRGQFQYHDAYMEMADARP
LDPMELRFTRRAAGIPILRNHGLPRVIIDAMPAGYGADRLNARHERNLSSLELLELGP
PDGVGAIEVCQDIERKLQWRPRLLSELIEHINDLEESAPSSRAIRRLLDDGMTSAGGE
RPKVTLQHDGRLWLAKLQDRGDVPHLPAREFVVMQMAEELDIQVPRILLEQHEGREVF
LVERFDRCGDPVQPQRHLFASAHTVLGLEANTTPGDARRSYLVLAEQMRRWIADKAAL
QIDLQELWRRMAYNALVGNGDDHPRNHGLIHEGRGWRLSKAFDITPLPTFIRVLALSV
APDGSQECSVLNLLDACPHFGFDPREAATWLGDAAVHVASHWQQRLRDNGVPAGHIGQ
FALAFDLATELAEYPNQIDEAMDEIELQRRKGRRRQHPR"
/locus_tag="Pnap_4129"
/locus_tag="Pnap_4129"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39418.1"
/db_xref="GI:"
/translation="MVKLRQEIHGIEHARERSNGHPRATLFKRHDRVRAHARKEGQIT
LIHRSGTACEGNALAKCDEFIAWKNGKWCSAHYPNRNLKFYFRLLFG"
/locus_tag="Pnap_4130"
/locus_tag="Pnap_4130"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39419.1"
/db_xref="GI:"
/translation="MHYQAQSRVRPDFNFLSFTVRTTEDATSGTQMKISFADTLCLKR
EAKKLGHKFPEKSYSHLRSLAAQQLFGVRSVHEFNRLRKQTVEQHLVLSDGMATCAFC
GLQFYPNVPEDSKTHQAKHDAFEEATTVLNYTPKFYAQREANKKHGYALLSDTDPETQ
VSGALEVLRSWFDRSLDAAIGESSYWKRHPKFEEYVGFMLGATPPFPAHVVASLEKQY
GRIDGVIEKGHSYWYPPK"
complement()
/locus_tag="Pnap_4131"
/locus_tag="Pnap_4132"
complement()
/locus_tag="Pnap_4133"
complement()
/locus_tag="Pnap_4133"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39420.1"
/db_xref="GI:"
/translation="MQLVTIEQLAKSVVASDGFNQQNTLAQIRHILEVALKSELAMST
LARLVALDLRNAHMITCSVQLASKANQPALSPWIAGVPPEDVDMAWLRLRSHDPDDEA
EVAVLGVLDLELGWMIAGDWKGESFTDQVLEAITHFIPYDVPSTRLPENAHIEKAAAF
RMWLKITSRDQPPAGTAR"
/locus_tag="Pnap_4134"
/locus_tag="Pnap_4134"
/note="KEGG: rso:RS02232 hypothetical lipoprotein
transmembrane"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39421.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000437"
/translation="MNYKFSSPLLIALIASACLAACGGGDLPPGSGSPAAIPAPASTV
SLTPSPELPPGQTAIDASSCFNPALYVEGASIAITTKATFGATDTVQIKTDTTMGGSV
TYLGIQVKQLTEVQTSMPDAPVSASGQITKTTVATRYLTADATAKNTRDYGFSSKSTP
LDPSVGATVVDTTYTPFMETRYALQFGRSFQQTFTDDSKITNPDGTKTSSAKSVVKTI
LYAGIEDVKVAAGTFKACKFQESGTTSDLTTSTQSVIPMKTIWYGVKNGLILKSMMDT
PVGKSYRTDTVELQSASINGVVVKP"
sig_peptide
/locus_tag="Pnap_4134"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.421 at
residue 24"
/locus_tag="Pnap_4135"
/locus_tag="Pnap_4135"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39422.1"
/db_xref="GI:"
/translation="MTIRKSDIRELNKLITHLITDYSILIAIENRDGCLIRIFDNPIT
LTLILARSEALQFNSIHATVFRTREAFMAVRLAVNRLERRFRRVESEHMVEGDIKSVV
NEIDYALAVYADQLDKVNIRTDQKRWHSKAPRTSLVRTQLAHTGQKPIPVQWLNQCDR
/locus_tag="Pnap_4136"
/locus_tag="Pnap_4136"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39423.1"
/db_xref="GI:"
/translation="MIAETKIVGVLSAYLFMGVNGYYFMKIDKKAAREDQLRISEAAL
IAIGFMCGWLGFFISCCDQHRIWLIYAEARHSEFS"
/locus_tag="Pnap_4137"
/locus_tag="Pnap_4137"
/note="PFAM: phage inte
KEGG: bxe:Bxe_C1182 putative phage integrase"
/codon_start=1
/transl_table=11
/product="phage integrase family protein"
/protein_id="ABM39424.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002104"
/translation="MAKIKLTKSAIDAAQPQAQPVELRDTLVPGFMCKVTPAGRKVFM
LQYRTNAGERRKPAIGLYGELTVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPTVKE
LCGRFMSDYSKVRNKPSTQKGYQGNIDRNIIPILGRMKVQDVKRPDVATMMKKLESTP
MEANHTLAVMRKMFNMAEIWGLRTDGTNPCRHIPQYPQGKTTRLITDEEMGKLFRHLD
KVEAESSEPPIVTLAIRLQFEFAARRSEILLLEWTWVDLENRRVAWPDSKTGGMSKPM
SEEAHRLLSTVPRHEGSLYVLPSLRDPLKHMTNGEHYNGWSRILKAAGVQHVGTHGIR
HRSATDIANSGIPVKVGMVLTAHKTVAMFMRYIHTEDAPVRQAAELVANRRKTVVAGT
/locus_tag="Pnap_4138"
/locus_tag="Pnap_4138"
/note="PFAM: protein of unknown function DUF891;
KEGG: bxe:Bxe_C1183 hypothetical protein"
/codon_start=1
/transl_table=11
/product="protein of unknown function DUF891"
/protein_id="ABM39425.1"
/db_xref="GI:"
/db_xref="InterPro:IPR009241"
/translation="MAAYEIEHYLTLGEQKDFYIEWLKRLRDGQAKVAVARRVIRIEQ
GNFGDHKFCRKGVWELRIDAGPGYRVYYALSGRRVVLLLCGGDKKTQDADIARAVDYW
QDWQRRTDDEK"
/locus_tag="Pnap_4139"
/locus_tag="Pnap_4139"
/note="KEGG: bxe:Bxe_C1184 predicted transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="putative transcriptional regulator"
/protein_id="ABM39426.1"
/db_xref="GI:"
/translation="MMRSRPHDDAMAELYRNDPAFALEVVNGILEDGDQAELLIVLRQ
MAEAFGGVQAVAEQAHLNPTQLYRTLSPKGNPALNSLRAILKAMGLRLAVQPLAAPAV
complement(1)
/locus_tag="Pnap_4140"
complement(1)
/locus_tag="Pnap_4140"
/note="PFAM: OmpW
KEGG: bxe:Bxe_C1185 outer membrane protein (porin), OmpW
/codon_start=1
/transl_table=11
/product="OmpW family protein"
/protein_id="ABM39427.1"
/db_xref="GI:"
/db_xref="InterPro:IPR005618"
/translation="MKIIASTLTCFAVATLSAGVHAQAFTNSPSPWSIGVGAVHLKFH
PSADVSFAGNPVPGGAVTVGSDTVLGVEIGYAVTPNWTARLDVGSPVETDFGGAGTLS
PLGKLGSVKGGPAILTMTYSPGMLGPIRPFFGGGLTYLRVFSTKDGAVQNLKVDDGLG
TALTIGADWPLSDGYSIGFSVQKLFLKVKATGTAGGAPVRADVKLDPVVTFLSLRKQF
sig_peptide
complement(1)
/locus_tag="Pnap_4140"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.990 at
residue 23"
complement(1)
/locus_tag="Pnap_4141"
complement(1)
/locus_tag="Pnap_4141"
/note="PFAM: alpha/
KEGG: bxe:Bxe_C1186
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold"
/protein_id="ABM39428.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR003089"
/translation="MTALTESSTSKFVKINEKGFSDFQIHYNEAGNGETVIMLHGGGP
GAGGWSNYYRNIGAFVEAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALD
IDRAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLY
AEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRNPEHLKNFLVSAQKAPLSTWDV
SARLGEIKAKTFITWGRDDRFVPLDHGLKLVWGINDARLHVFSKCGHWAQWEHADEFN
RLVIDFLRHA"
complement(1)
/locus_tag="Pnap_4142"
complement(1)
/locus_tag="Pnap_4142"
/note="PFAM: pyruvate DmpG
KEGG: bxe:Bxe_C1187 4-hydroxy-2-oxovalerate aldolase
/codon_start=1
/transl_table=11
/product="pyruvate carboxyltransferase"
/protein_id="ABM39429.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000891"
/db_xref="InterPro:IPR012425"
/translation="MNLQGKQVTVHDMTLRDGMHPKRHLMTLDQMKSIACGLDAAGVP
LIEVTHGDGLGGSSVNYGFPAHTDEEYLGAVIPLMKQAKVSALLIPGIGTVEHLLMAK
DLGVGTIRVATHCTEADVSEQHITKSRALGLDTVGFLMMAHMASPEKLVSQALLMQGY
GANCIYVTDSAGYMLPDDVKARLGAVRAALKPETELGFHGHHNMAMGVANSIAAIEAG
ANRIDAAAAGLGAGAGNTPMEVFIAVCARMGIETGVDVFKIQDVAEDLVVPIMDHIIR
IDRDSLTLGYAGVYSSFLLFAKRASVKYGVPARDILVELGRRGMVGGQEDMIEDTAMT
MARERGLTLAAA"
complement(1)
/locus_tag="Pnap_4143"
complement(1)
/locus_tag="Pnap_4143"
/note="PFAM: Semialdehyde dehydrogenase, NAD -
KEGG: bxe:Bxe_C1188 acetaldehyde dehydrogenase
(acetylating) (BphJ)"
/codon_start=1
/transl_table=11
/product="Semialdehyde dehydrogenase, NAD - binding"
/protein_id="ABM39430.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000534"
/translation="MTKKIKCALIGPGNIGTDLLAKLQRSAVLEPVWMVGIDPESDGL
KRAREMGIKTTADGVDGLIPHMQADGVQIVFDATSAYVHAENSRKVNAQGALMIDLTP
AAIGPFCVPPVNLIEHVGKGEMNVNMVTCGGQATIPMVAAVSRVQPVAYGEIIATVSS
KSAGPGTRKNIDEFTRTTASAVEKVGGAKKGKAIIILNPAEPPLIMRDTVHCLLESEP
DQAKITESIHAMIQEVQKYVPGYKLVNGPVFDGKRVSVFLEVEGLGDYLPKYAGNLDI
MTAAAARTAEMFAEEILAGRLTLKPVHA"
complement(1)
/locus_tag="Pnap_4144"
complement(1)
/locus_tag="Pnap_4144"
/EC_number="4.1.1.77"
/note="PFAM: Hydratase/
KEGG: bxe:Bxe_C1189 2-hydroxypenta-2,4-dienoate hydratase
/codon_start=1
/transl_table=11
/product="4-oxalocrotonate decarboxylase"
/protein_id="ABM39431.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002607"
/translation="MTPELIETLGDELYHAMTTQTVVEPLTTRHPDITIEHAYHIQQR
MISRRLQAGERIVGKKIGVTSAAVMNMLGVYQPDFGYMLDGMIVSDGGSIAMSSLIQP
KAEGEIAFVLKKDLMGPGVTNADVLAATDFVMPCFEIVDSRIRDWKIKIQDTIADNAS
CGMFVLGSTAMDPRKLDLMTCGMVLEKNGEIIATGAGAAALGSPVNAVAWLANTLGRL
GIGLKAGEVILSGALAAMFPAKAGDHFRVTIGGIGGCSVRFH"
complement(1)
/locus_tag="Pnap_4145"
complement(1)
/locus_tag="Pnap_4145"
/note="PFAM: Glutathione S-transferase, N-
Glutathione S-transferase, C-
KEGG: bxe:Bxe_C1190 glutathione S-transferase (BphK)"
/codon_start=1
/transl_table=11
/product="Glutathione S-transferase, C-terminal domain"
/protein_id="ABM39432.1"
/db_xref="GI:"
/db_xref="InterPro:IPR004045"
/db_xref="InterPro:IPR004046"
/translation="MKLYYSPGACSLSPHIALREAGLNFELVQVDLASKKTASGQNYL
EINPAGYVPCLQLDDGRTLTEGPAILQYVADQVPGKLLAPANGSFERYHLQQWLNFIS
TELHKNFSPLFNPAASEDWRNAVRQAIAARLGVVATRFEDAPYLLGDSLSVADIYLFV
VLSWGAYVNLDLSPWPALQAFMGRVGGREAVQAALRAEGLVKD"
complement(2)
/locus_tag="Pnap_4146"
complement(2)
/locus_tag="Pnap_4146"
/note="PFAM: Glyoxalase/bleomycin resistance
KEGG: bxe:Bxe_C-dihydroxybiphenyl-1,2-dioxygenase
/codon_start=1
/transl_table=11
/product="Glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="ABM39433.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000486"
/db_xref="InterPro:IPR004360"
/db_xref="InterPro:IPR011588"
/translation="MSVKSLGYMGFAVKDVSAWRSFLTQKLGLMDAGVTDDGALFRID
SRAWRIAVQQGEADDLAYAGYEVADAAGLTQMTEKLRQAGIEVVTGDVELAKRRGVMG
LISFADPFGLPLEIYYGASEVFEKPFMPGAAVSGFLTGEQGLGHFVRCVPDSEKALAF
YTQVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVSSL
NDVGFAFDRLDADGLITSTLGCHTNDHMVSFYAATPSGVEVEYGWAARTIDRSWVVAR
HDSPSMWGHKSVRNKA"
complement(2)
/locus_tag="Pnap_4147"
complement(2)
/locus_tag="Pnap_4147"
/note="PFAM: short-chain dehydrogenase/reductase SDR;
3-beta hydroxysteroid dehydrogenase/ KR;
KEGG: bxe:Bxe_C1192 cis-2,3-dihydrobiphenyl-2,3-diol
dehydrogenase (BphB)"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="ABM39434.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/translation="MKLTGEVVLITGGASGLGRALVDRFVAEGARVAVLDKSAERLQQ
MESDHGDKVVGIVGDVRSLQDQKQAADRCVAKFGKIDTLIPNAGIWDYSTALVDLPED
RIDAAFDEVFHINVKGYIHAVKACLPALVASRGSVIFTLSNAGFYSNGGGPLYTAAKH
AVVGLVRELAFELAPYVRVNGVAPGGMSTDLRGPSSLGMSGQAISTVPLADMLESVLP
IGRMPDTEEYTGAYVFFATRGDTVPATGALLNYDGGMGVRGFFSAAGGKDLLEKLNIK
complement(2)
/locus_tag="Pnap_4148"
complement(2)
/locus_tag="Pnap_4148"
/note="PFAM: FAD-dependent pyridine nucleotide-disulphide
KEGG: bxe:Bxe_C1193 biphenyl 2,3-dioxygenase ferredoxin
reductase subunit (BphA4)"
/codon_start=1
/transl_table=11
/product="FAD-dependent pyridine nucleotide-disulphide
oxidoreductase"
/protein_id="ABM39435.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR003042"
/db_xref="InterPro:IPR013027"
/translation="MIESIVIIGAGLTGAMAARALRAQGYAGRLHLIGDESQQAYDRT
TLSKQVLTGEQAEPPAIMDASWYASANVEVQLGRRVSGLDVASRQVRFESGAPLAYDR
LLLATGARARRVAIPGCDLAGIHILRDRADSLALRQALQPGQSLVIVGGGLIGCEVAT
TARKAGVTVTLLEAGDELLLRVLGRRTGAWCRAELERLGVQIERNAQASRFEGEGHVR
AVICADGRRVAADGVLVSIGADPADELARAAGIACARGVLVDATGASSCPDVFAAGDV
AAWPLRGGGQRSLETYLNSQAQADTAAAAMLGKPVPTLQVPTSWTEIAGHRIQMIGDA
EGPGEIVPRGDAQNGQPLVLFRLLDGRVEAATAINAAKEFSVATRLVGARVPVSAGQL
QDAGLNLRDLLKAKPQ"
sig_peptide
complement(2)
/locus_tag="Pnap_4148"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.945) with cleavage site probability 0.816 at
residue 24"
complement(2)
/locus_tag="Pnap_4149"
complement(2)
/locus_tag="Pnap_4149"
/note="PFAM: Rieske [2Fe-2S]
KEGG: bxe:Bxe_C1194 biphenyl 2,3-dioxygenase ferredoxin
subunit (BphA3)"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain protein"
/protein_id="ABM39436.1"
/db_xref="GI:"
/db_xref="InterPro:IPR005806"
/translation="MEFTRVCSLSEVPQGEALKVESGDTAVAIFNVEGELFATQDRCT
HGEWSLAEGGYLDGDVVECSLHMGKFCVRTGKVKSPPPCVPLKIFPIRIEGNDVFVDF
complement(2)
/locus_tag="Pnap_4150"
complement(2)
/locus_tag="Pnap_4150"
/note="KEGG: bxe:Bxe_C1195 hypothetical membrane protein,
biphenyl pathway"
/codon_start=1
/transl_table=11
/product="conserved hypothetical membrane protein,
biphenyl pathway"
/protein_id="ABM39437.1"
/db_xref="GI:"
/translation="MRQARTFLLAVGVFYLLNLVGTLPFRALGLFDMMYPGVEMDVGL
PMFKLLQDAWFVVGLQLGAIGVVALWGARDPQRYLALVPLVIATEVVTALWDFYSMAW
GRMALGFWLALLVVHAAWIVWGLRVWRAARLER"
complement(2)
/locus_tag="Pnap_4151"
complement(2)
/locus_tag="Pnap_4151"
/EC_number="1.14.12.3"
/note="PFAM: aromatic-ring-hydroxylating dioxygenase, beta
KEGG: bxe:Bxe_C1196 biphenyl 2,3-dioxygenase small subunit
/codon_start=1
/transl_table=11
/product="Benzene 1,2-dioxygenase"
/protein_id="ABM39438.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000391"
/translation="MTTPSTNLFKAFEWPSKAVGLELQNEIEQFYYREAQLLDHRAYE
AWFALLEKDIRYFMPLRTNRRLQESELEYSGDQDFAHFDETHETMYGRIRKVTSELGW
AENPPSRTRHLVSNVMVREAAEPNTFEVSSAFILYRNRLERQVDIFAGERRDVLRRAD
NGLGFKIAKRTILLDQSTLLANNLSMFF"
complement(2)
/locus_tag="Pnap_4152"
complement(2)
/locus_tag="Pnap_4152"
/note="PFAM: ring hydroxylating dioxygenase, alpha
Rieske [2Fe-2S]
KEGG: bxe:Bxe_C1197 biphenyl 2,3-dioxygenase alpha subunit
/codon_start=1
/transl_table=11
/product="ring hydroxylating dioxygenase, alpha subunit"
/protein_id="ABM39439.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001663"
/db_xref="InterPro:IPR005806"
/translation="MSSTIKEVQESTVKWTRNWTPEAIRALVDQEKGLLDPRIYADQS
LYELELERVFGRSWLLLGHESHIPKTGDFLTTYMGEDPVVMVRQKDRSIKVFLNQCRH
RGMRICRSDAGNAKAFTCSYHGWAYDIAGNLVNVPFEQEAFCDKKEGDCGFDKADWGP
LQARVATYKGLVFANWDAEAPDLETYLGDARPYMDVMLDRTPAGTEAIGGMQKWVVPC
NWKYAAEQFCSDMYHAGTMSHLSGILAGMPPEMDLSNAQVPTKGNQFRAHWGGHGSGW
FVDEPGMLMAVMGPKVTQYWTEGPAAELAEKRLALPVRRMFGQHMNIFPTCSFLPAIN
TIRSWHPRGPNEIEVWAFTLVDADAPAEIKEEYRRHNIRTFSAGGVFEQDDGENWVEI
QKVLRGHKAKSQPLNAQMGLGRSQTGHPDFPGKIGYVYAEEAARGMYHHWARMMSEPS
complement(2)
/locus_tag="Pnap_4153"
complement(2)
/locus_tag="Pnap_4153"
/note="PFAM: regulatory protein GntR, HTH; GntR domain
KEGG: bxe:Bxe_C1198 transcriptional regulator BphR, GntR
/codon_start=1
/transl_table=11
/product="transcriptional regulator, GntR family"
/protein_id="ABM39440.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011711"
/translation="MSTRTSNRLTMGGDKSFADAPVPRANARSLIESACQRLRADIVE
GQLAAGARLGIEDLKSRYGVSGGTVREALSLLVAEGLVQTQAQRGFHVTPMSLGDMRD
LATTRIALECEALRQSILNGDAEWETRVVSSFHRLSLIEERTMRDPVHLFNEWERDNR
DFHEALISACPSCWTRRFLSILYLQMERYRRLTSVHNPPARNVHEEHQALRDSALARD
AERCTALLRAHIESSISVVQQFGLLR"
complement(2)
/locus_tag="Pnap_4154"
complement(2)
/locus_tag="Pnap_4154"
/note="KEGG: psb:Psyr_2657 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39441.1"
/db_xref="GI:"
/translation="MDQEVSDLWPHVGADQERIRASLATNQLSYQTNGFITLAGSSPA
AKTLADYFKARDFASIEAEFGRAISQIDRDPHAAITASSAIIEALCKTYIEINRLEMP
AKQTIGPLWKVVQQHLGLNVDHTLQDDQKRILQGLASIVDGVGAYRTHIGSAPIAKMS
complement(2)
/locus_tag="Pnap_4155"
complement(2)
/locus_tag="Pnap_4155"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39442.1"
/db_xref="GI:"
/translation="MPPSFLSSSPAKDRASEGLAVKEASAGLVRPTASGEDSALRALT
ARHRWLRSREKAMNLGKDEQRPMGQGCAETNAARQAPLRAKGTPSWMSVGRSGVACSA
VFEGRQTECGGDGLSSRSPGGKAQRAGRERRDGRRHQGSKPDGHDSTRGMGQRPRARR
RNAEMPGLRETGGISSQSRGSTP"
/locus_tag="Pnap_4156"
/locus_tag="Pnap_4156"
/note="PFAM: protein of unknown function DUF932;
KEGG: rme:Rmet_1477 protein of unknown function DUF932"
/codon_start=1
/transl_table=11
/product="protein of unknown function DUF932"
/protein_id="ABM39443.1"
/db_xref="GI:"
/db_xref="InterPro:IPR009276"
/translation="MQLSSRFASRSPVLRADHPLSDDQIRTVAPSIFAEDKHASRSDR
YRYIATGAVLSELRKEGFQPFMVCQTRVRDEGKREHTKHMVRLRHADQINGAEANEII
LLNSHDGTSSYQMMAGLLRFVCKNGLVCGDVVADVRIPHKGDVIGHVIEGAYDVLDGF
DLVRERRDEMRAITLDRGEAEVFAHAALSLKYDDPTAPAPITESQLLMPRRRDDDRPD
LWSAYNRVQENLTQGGLHGRTATGRKHSTRPIQGIDQNVKINRALWMLAEGMKRLKA"
/locus_tag="Pnap_4157"
/locus_tag="Pnap_4157"
/note="PFAM: DNA repair protein RadC;
KEGG: rso:RSc2620 hypothetical protein"
/codon_start=1
/transl_table=11
/product="DNA repair protein RadC"
/protein_id="ABM39444.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001405"
/translation="MSQLSLSLDSSLLVRDVAGDYRPANADEVLQAAQRLLGAQLRGR
EVLTSPQAVRDFLRVKLGGLEHEVFAVLMLDAQNRLIEYVELFRGTVSQASVYPREVV
KESLALNAAAVIFCHNHPSGVAEPSRADEVLTQTLKTALSLVDVRVLDHLIVAGNEIM
complement(3)
/locus_tag="Pnap_4158"
/locus_tag="Pnap_4159"
/locus_tag="Pnap_4159"
/note="PFAM: ParB dom
KEGG: rme:Rmet_1478 ParB-like nuclease"
/codon_start=1
/transl_table=11
/product="ParB domain protein nuclease"
/protein_id="ABM39445.1"
/db_xref="GI:"
/db_xref="InterPro:IPR003115"
/translation="MNTVTHQEVQALEAAAPSQNMLLVPLSQLRPSKRNVRKTLGASI
TELATSVERVGLLQNLTVTLASDGEHYEVVAGGRRLAALKLLAKKRRIAKDYAVPCLL
VADASARTASLTENVQREAMHPADQFEAFADLIAEGRPIEDIAADFGVTPLVVQRRLK
LANVSPRLMADYRADTVNLDQLMALAITDDHAAQEAAFYDAPNWQRNPTALRERLTER
EIDAHRHPLVRFVGLEAYEAAGGGIRRDLFADADQGIYLTDAALIDRLAQDKLAGIAD
EVRREGWAWVEAVPAATYADLQAFQRAPKERRKPNAREAKRIAKLQAKVLEVGEALDA
ALEAEDEEKAEALQEEGERLGEQLEALEAELLAYGSTVRAAAGAIVTLDRQGEPVIHR
GLLRDAEAKALRTLARVQGGIDSEDTEDEDSPEPKKAGISEKLARRLSAHRTAALQIE
LARNPQASLAALVHGMVQRVLQDAHAVELPIGISIRPQDRLEGYAPDWPQSPAAVALR
ELQQACGEKLPEDDAELFAVLLALSQDELVRLLAVCVASTVDVVSSREHDASGKVLAQ
AVGLDMAAWWKPTAEGYFSHVSKAVILEAVQQFAPGNVSRLAKLKKADIASEAERLAE
GTGWMPAMFKSEDSTSAAQDDAQQESSQNATNDTPEEAAQEAVIEMEAVAEALAA"
complement(3)
/locus_tag="Pnap_4160"
/locus_tag="Pnap_4161"
/locus_tag="Pnap_4161"
/note="PFAM: protein of unknown function DUF736;
KEGG: rso:RSc2613 hypothetical protein"
/codon_start=1
/transl_table=11
/product="protein of unknown function DUF736"
/protein_id="ABM39446.1"
/db_xref="GI:"
/db_xref="InterPro:IPR007948"
/translation="MANIGTFTADKDGFTGTLRTLTLNVKVKFIQNDKTSENAPDYRI
QAANGLEVGAAWKKISQAERPYLSASLDDPSFPATVYARLIEGEDGTHNLIWSRSKGD
complement(3)
/locus_tag="Pnap_4162"
complement(3)
/locus_tag="Pnap_4162"
/note="PFAM: helix-turn-
KEGG: xac:XAC2176 hypothetical protein"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, XRE family"
/protein_id="ABM39447.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001387"
/translation="MQKRSIQRGRPAGATTFEAEPAQAFGAAVRALRTEQGVAQETLA
HLAGIERSHMGKIERGEHMPTLAIILKIARALGCSSADLMTATESRLTASEPEH"
/locus_tag="Pnap_4163"
/locus_tag="Pnap_4163"
/note="KEGG: rso:RSc2609 probable lipoprotein"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="ABM39448.1"
/db_xref="GI:"
/translation="MTQSLITDEQRAQLLANSRASAEGQDIDPTPVVKLFTPDAHATW
LLTELDPEDGDTAFGLCDVGIGMPELGNVRISELASIVGPLKLPIERDLYFVAQRTLS
DYARLARINGSIID"
/locus_tag="Pnap_4164"
/locus_tag="Pnap_4164"
/note="KEGG: zmo:ZMO1936 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39449.1"
/db_xref="GI:"
/translation="MAELSSDHWRPSAAYLYVLHLDGPALAWEYLRRDLDYRRDWLRR
QRHPEVAQRWGLRLLEDPGQDARDAHPAWFPDHDTVVQLYPDADPPPNAGLFEFWRIP
GHKQLIHDGRRLVLIVRQPGCCLRMALAPALEDGMAYVYAIRACQAPCVRYRALAGEL
NKLQEASNTTPAGVVKPRPSPSSLLELHTLQALDGTLAGASLRTVADVLFGPDAVAEG
WHADGDLRARVRRLVQRGKKLMRGGYRRLAQLPPLEQGRFASDAKRP"
/locus_tag="Pnap_4165"
/locus_tag="Pnap_4165"
/note="KEGG: zmo:ZMO1937 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39450.1"
/db_xref="GI:"
/translation="MRPVPLRPAAAPAATQQPAQPVRYLTNDEAAEFLRLSPRTLEKQ
RVIGGGPRFRKFGRRVMYAVADLETWADARSFEATSDPEYAERHSGDSRDGQHGRR"
/locus_tag="Pnap_4166"
/locus_tag="Pnap_4166"
/note="KEGG: rso:RSc2606 hypothetical replication
initiator and transcription repressor protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical replication initiator and
transcription repressor protein"
/protein_id="ABM39451.1"
/db_xref="GI:"
/translation="MSSPSLLPAQTMQQHEQLDLFRALPGDMAPRDAQDLMAYPFFSL
AKSRRIAPIDFRSGGVTVRVEGTAEHGIATIWDADILIWAASQIVEARDAGIRSSRRM
QATPYEILRFIGRGTSLHDYQRLKAALDRLQSTSVATSIRETTGRRLHRFSWINEWKE
RADSKGVPLGLELILPDWFYAGVLDEALVLTIDPAYFKLTGGIERWLYRLVRKHGGKQ
PGGWQFDFPHLHRKSGSSARFSDFAYDLRALVARQSLPGYTLSIERLPGEPEILAFRP
/locus_tag="Pnap_4167"
/locus_tag="Pnap_4167"
/note="PFAM: Cobyrinic acid a,c-
KEGG: rme:Rmet_1486 cobyrinic acid a,c-diamide synthase"
/codon_start=1
/transl_table=11
/product="Cobyrinic acid a,c-diamide synthase"
/protein_id="ABM39452.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002586"
/translation="MIIALLNQKGGVGKTTLATHIAGELAMQGKQVILLDADPQGSSL
DWTQRRSQQGLPRLFSAVGLARETLHQEAPELARRCDHIVIDGPPRIAALARSALLAA
DCVLIPVQPSPYDVWASAEMVALIREAQVFRPTLRAAFVINRRVSTTVIGREARNSLA
DQPLPALRAEIRQRIVFADSVAAGRLARELVPDSAAAREITALVDELLRWSP"
/locus_tag="Pnap_4168"
/locus_tag="Pnap_4168"
/note="KEGG: rme:Rmet_3022 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39453.1"
/db_xref="GI:"
/translation="MTSKRIAIGARPPANPQAEAWIRQGEGADINKGDLYTARLTLDV
TPALRARIKVSAFTQGTTVAELLRALLEHEFPEKTP"
/locus_tag="Pnap_4169"
/locus_tag="Pnap_4169"
/note="KEGG: rme:Rmet_1257 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39454.1"
/db_xref="GI:"
/translation="MNTNTQVQPTTSAAAPPPSLPALTGQVGNVPLTRVALAYVDKRI
NLYLRFGNPARTIQLDRWRRSAVFLPAFIFCRIRWESNDYGTTRWQLMVMQACTPLDA
VQRIPGIHPGARILLHAEGERQVQAVLPLIDAIEALGIAPIDVSPAYWRTLGNRLSAH
LALPQYTAERHAAWLAGKELQ"
/locus_tag="Pnap_4170"
/locus_tag="Pnap_4170"
/note="KEGG: rme:Rmet_1488 putative conjugal transfer TRAF
transmembrane protein"
/codon_start=1
/transl_table=11
/product="putative conjugal transfer TRAF transmembrane
/protein_id="ABM39455.1"
/db_xref="GI:"
/translation="MTAKPRSRLCAHLVLAVLSTCGLAAMAWASFAMPSAHVVYNPSN
SVPVGWYRIESVTSPADSLHVGSIVLARLPAEAAALAAQRGYLPPHIPLLKRIGAVAP
QDVCIVNGVVRIDGVPVAAVLRTDRMGRPLLSWQQCRALAEGELFLLSVTNPASFDSR
YFGPIAASAVIGTAQSVYLEKQP"
sig_peptide
/locus_tag="Pnap_4170"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.684 at
residue 33"
/locus_tag="Pnap_4171"
/locus_tag="Pnap_4171"
/note="KEGG: rme:Rmet_1489 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39456.1"
/db_xref="GI:"
/translation="MSRRGNSDGEDRFSIRPGAPKQRGQAFVSQVLRQASKGANSTGR
KPGKTPGSRLGRGHVAARFTGQSLSATSRRATVKVRLVYLKQAGARSTITHLRYIERE
GVGREQDAGKAYGPMTDEADLPAFEERGREVRHQFRLIVSPEDAEQLDDLRTYTRHLM
GRMEADLGSRLDWVAVNHWNTDNPHTHIVLHGKDDTGKDLIISQAYITRGMRERAAEL
STEWLGPRIELEIQRTLVREVDQERWTSLDRTLQREAKDGLNHVDQPASDPNLRQQRV
LLVGRLQRLQRMGLASEQQPGVWVVHADAEPVLRAMGERGDIIRTMQRAMGGAQRDLA
VFQPGQDSRSVIGRVAGKGLADELYDKGYLVVDGIDGKAHYVALPAKMELAQYPVGTI
VEARGSVEFRAADKNIVALAVDGLYRTDHHLAVAKAQATSGRDPHEVIDAHVRRLEAL
RRAGIVERIAEGVWRVPVELPEQGRQYDMQRLGGVSVELRSHLPIERQAFVIGATWLD
QQLIGGASGIADNGFGGEVRNALRQRANFLIDQGLAERRGQRLILARNLLATLRGREV
EAAGGRIAAETGLAHRPVADGERITGVYRRSVQLASGRFAMLDDGIGFSLVPWKPVIE
QRLGQTLTAVVRGGGVSWEFGRQRGPSIG"
/locus_tag="Pnap_4172"
/locus_tag="Pnap_4172"
/note="PFAM: regulatory protein, TetR;
KEGG: pol:Bpro_5551 transcriptional regulator, TetR
/codon_start=1
/transl_table=11
/product="transcriptional regulator, TetR family"
/protein_id="ABM39457.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001647"
/translation="MAEKAPKKKKMREEVLERSVPLFATVGFDGVSMRDIAAAVGVTP
AALYHHFSDKEQLYLDAVGYAFEEKVGPLKTLLDGGGNPWERIEAFITRLANLLAAER
DFLRLMQWVLLDSDERRQRSLVDCVFRDLFNALRDFAAELAPGHDAHRLAVSIIGLVL
YPFETQSVRRFLPGYTHQQEDPEAIARHIVGLLRNGLGGINEENP"
/locus_tag="Pnap_4173"
/locus_tag="Pnap_4173"
/note="PFAM: Late embryogene
KEGG: pol:Bpro_5552 late embryogenesis abundant protein"
/codon_start=1
/transl_table=11
/product="Late embryogenesis abundant protein"
/protein_id="ABM39458.1"
/db_xref="GI:"
/db_xref="InterPro:IPR004238"
/translation="MKLQKWLVLSVLVIGASAQAAEDPAAKPVEPAKVSVLQKAEEGA
KKAAEEAKEATRKAAEAAKLAVDKAEQAVSEASQKTAEAARQAARDADEAAKLAVRKT
AEATRKATAATKEAAQKAEEAAKKAAVATKEAAQKAEEAAKKAAKSGKEAAQKAAEAT
RDAAQKTTEATREAADKALEATKETARNVKDAVTK"
sig_peptide
/locus_tag="Pnap_4173"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.978 at
residue 21"
/locus_tag="Pnap_4174"
/locus_tag="Pnap_4174"
/note="KEGG: pol:Bpro_5553 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39459.1"
/db_xref="GI:"
/translation="MSKSNTPSSTTKDKLIADIKQIVADADALLQATTDQASEKVADL
RIGLRKNLKTAQGRLAEFEATAVDKTTEAIREALQKISEAANQATVATMEAAQKAEEA
AKKVAGSGKDAAQHAAEAARDAAQKAVAATREAANKALDAMQDWMR"
/locus_tag="Pnap_4175"
/locus_tag="Pnap_4175"
/note="KEGG: pol:Bpro_5554 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39460.1"
/db_xref="GI:"
/translation="MQNETGNNIGGSNDAVMLEAEVRSAVEQGHDVQEMVRQLTLRKI
SARSLDIESLRQIARAVLSGARAGAQKELQQSAAQTEIMRTRLKQAVAGLDAALAQFA
EASKLAVEEAAVRAQTFSREDLARARTDLESLEAMFLETLQSSASGAKDAAGEILSDL
ARHARLYGSAVRAQLKETLAVITHQLGTAGRTQVVAGLHLAQATSDLLRQIAAGVLTG
LADHVKPGHSQGKGN"
/locus_tag="Pnap_4176"
/locus_tag="Pnap_4176"
/EC_number="1.14.13.-"
/note="PFAM: ABC-1
KEGG: pol:Bpro_5555 ABC-1"
/codon_start=1
/transl_table=11
/product="2-octaprenylphenol hydroxylase"
/protein_id="ABM39461.1"
/db_xref="GI:"
/db_xref="InterPro:IPR004147"
/translation="MLWQALTAVRDIGRLHDITSILIRYGFGDMVRRMGLANALERAG
RALHWNEAQELAHLDPPARVRRALEELGPTFVKLGQVLATRIDLFEPEWIAEFGKLQD
SAPAASYAGIRQQLTEDLGAPPEEVFAAFDPEPLAAASVAQVHRARLEDGSEVVVKVR
RPGIRPIIEADLRWLARLAKLAEGESPELRAFRPQEVVRQFSQSLRRELDFAGECRNA
EHIAENFAGYTDKDEPTGDASAEAAPEPPPALPIIIIPRVYWQWTGERVCVQEFIAGI
SGRKLATVDEAGLDRKVLARRGAHAVLKMIVEDGFFHADPHPGNVFYLPGNRIAFIDF
GMVGRLTEVRRDQLTGLLLGLVKHEPRRVADVMLDWTGDGAMDEDGLLVEIQTFVQQY
HGVALKQLRLGAMLSDLVAILRQHQLALPPDLSLLIKAFISLEGMGRELDPDFDMAGE
AMPLLEQALRARYAPTALLQRGWRGVSEALSLVAGLPQDISRLLRAARRGRLEIHIDI
THLKRVGNQLDSAANRLVVGIVVAALIIGSSIVMTVPGGPTLLGLPFFGLLGFVGAVI
GSLWLLLSIWRSGGKE"
/locus_tag="Pnap_4177"
/locus_tag="Pnap_4177"
/note="PFAM: Glycosyltransferase 28, C-
KEGG: pol:Bpro_5556 UDP-N-acetylglucosamine:LPS
N-acetylglucosamine transferase-like"
/codon_start=1
/transl_table=11
/product="Glycosyltransferase 28, C-terminal domain"
/protein_id="ABM39462.1"
/db_xref="GI:"
/db_xref="InterPro:IPR007235"
/translation="MSGSQTAQGFGADPLIALALAAAFTLLVALAWLALVRQRSRARH
PASDVPAASDVGAAPPRKIVIFYSSIGHGHISAAQAIQEEIGRLAPGARVILQDIREF
MHPLWRWVDERLYWFIAGNLPESFDALFHALQARGNRVPSLAWLSNDYPEDQVRAFLE
AQAPDAILATHYGSAQVLGTLRERGLLAQVNIGWLHTDFFEGYFPRISKRIDRTFLAH
PELEARWLAAGVAPDKVTTSGMPVRVAAADGRTREMALTALGLAPDAPTVLITSGKEG
VGDYALVVESLARHHQGPLQIIAVCGANARQQALLNVLRMALQKRLPEPVALKVCGLV
PHADLLAWMRAADLLITKAGGMTPAEAFAVGTPTILLDVVSGHERENAALFVRLGVAE
LADTLAQAGELAAAVLADPQRQAAMRHAQHAFHDSADLGRIARFALDPALPAPGMTPD
FGAEHGSAVTDIDAALARLQAEAPCDIELLLSYSTAQTPQRVVLENPFGHIAIRVDNT
VYSANYVAVPGHDPNLLQHVTLADYLYGVQPPSPSQVHTNTYGMAYGRETLGLRVAGV
AAERKAAMVAEAHRIEDEFGQGRLLWDRSEFNCADVVVRILRAGGYDRSPPLGRRWLP
VMPLDIFEEARQTCEEDASLYMELVAYRQIPGANAAYRFSRFPLSLGQPLRSVARALR
EAPQEPLEAAATKQLTGYFGDHQLYFEDLRGHGAGALADDPAHFSRVQRSLADALATD
LRRLLAAQARRPLREIGRLGELDGAQDIRRLLERSLALARIATERADEVLQDRGARRM
RALFTELVDGYGRIGAWHLRRQEIEAYLKRFQVFEAAVGREFPARHGARLARATTLRR
SLRYGIRRLCRRVGGRHRPTGHGPDKGASQ"
/locus_tag="Pnap_4178"
/locus_tag="Pnap_4178"
/note="PFAM: P
KEGG: pol:Bpro_5557 patatin"
/codon_start=1
/transl_table=11
/product="Patatin"
/protein_id="ABM39463.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002641"
/translation="MNEPQTSKAPAASLTPPKRPRIGLALGSGSARGLAHVGVLRALK
EANIEIDLVAGTSMGAVIGAVFASGKIDGLSARLRNLDWPGIVALLDPVFPRSGLIDG
QRVAEFVRAHVPSAHIEGLLLPFAAVATDLMTGEEVVTTAGDLTEAVRASIAVPGIFT
PVRSNGRILVDGGLVNPVPVSVARAMGADLVIAVDLNHDIVAGRLSHPAAHANGNGHG
PIMARLLESLRAINSPVLAQFEAWLHKPTLEPLPGIFEVLLASIYIMQARVTEADLRQ
TQPDLLIQPPLGAVRFMEFDRAEEIIDIGYRSAAEQLARWTRTPTHD"
/locus_tag="Pnap_4179"
/locus_tag="Pnap_4179"
/note="KEGG: pol:Bpro_5558 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39464.1"
/db_xref="GI:"
/translation="MTDTHPMNFPETVIAGVHAAVASTLTCEAVPVRGALRLLLLGQN
TPIRALVTCSLHAGQPGIDAGTALDLIHIGLQQLHAHVDATTGASALLGTGATVLAGD
YLTTGAFRLLVRCADLQVLALVSDAVNRASELEATQLGLDPDARDDPSRLLQTRQQLA
APLGEAAGATGATLAGYPEPLAGTARRYGQYLVSSHVLQQEADAMDISEARTALQDAA
LDLCRQARREARTIAAATGNGRPLELAELIAASLGAKASACKPKTITSTSS"
/locus_tag="Pnap_4180"
/locus_tag="Pnap_4180"
/note="TIGRFAM: efflux transporter, RND family, MFP
PFAM: secretion protein HlyD
KEGG: pol:Bpro_5559 secretion protein HlyD"
/codon_start=1
/transl_table=11
/product="efflux transporter, RND family, MFP subunit"
/protein_id="ABM39465.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR006143"
/translation="MKDPLVKKRKNLLLYLAPLALAALLGACGKAPEAPAASNTTSRP
LPVMTASAGAPLEYTAVGSVVSDQRVEVASRLSGYIRDMLVQEGDRVRRGQLLTRLDA
SDVEGGIRQGQAAGGAAEAALRDAQIDLERFQRLFERGSVSDNELRKVRLKFEAAREA
RNQARAGLDTALAQRAYAEITSPVDGVVVARHKRTGDLALPGMPLLTLESGRGLLFET
FVAEGQVAAIAAGQPVQVNIDGVPAALKGTVSRVVRSGDPVSRSYQVKITLPETAGLM
PGMFGRAAFGLGASQAPLVPRQALVERGGLTGVFVVDAEGRARFRWLRIAREWPDQVE
VSAGLAADERFVAAATPALREGDRVTAAKEAQ"
sig_peptide
/locus_tag="Pnap_4180"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.996) with cleavage site probability 0.558 at
residue 30"
/locus_tag="Pnap_4181"
/locus_tag="Pnap_4181"
/note="PFAM: acriflavi
KEGG: pol:Bpro_5560 acriflavin resistance protein"
/codon_start=1
/transl_table=11
/product="acriflavin resistance protein"
/protein_id="ABM39466.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001036"
/translation="MSQHKLNSAGRLANLFVTSKLTILFMLACILLGLLAVTLTPREE
NPQIVVPGAQVWVTLPGASAEEVEELVIRPLEGIVKQIAGVDHTYATAMNSMGVLMVQ
FKVGEDKEKSLVKLYDRVLGQRERLPAGAGEPLIRSVDVDDVPIVTVTLASEIYDDYA
LKRLADRLMEGLRSLDKVSAISVKGGRDRELRIELDPQRLQAFGVTLDQVHATLRASN
VAAPLGTVVQQGQNRQVFLDGFLSSAQDLKRVIVGSHAGRPIYLGDVAQVVDGPPQER
THLSRLAFGPADARFGKTQQAEMPAVTLAVAKKAGSNAVFVANDVLERIDRMKAQFVP
AGVELVVTRNDGEKADAAVSGLIEHLGIAVLAVFLVTAAFLGLKEALIVGVTVPLILA
LTLGAAYLFGLSINRVSLFALILSLGLLVDGAIVVIENIHRNYSRLGKQDKRLVTVQA
TNEIGNPTNLATLAVMLVFGSLLVVSGMPGQYFYPVAFNVPVAMAASLLVAYAVVPWA
ANRWLKPGEGHDLEDHDTQDRLHRFYRHVMSPLVDRSRSRWLAFLLAGLAIAVSLLQP
AWQFVRPSGLGGPQSWFGVELAMMPKDDKNTFNITLDMPATAPVEATDRFAREVGALL
RENAYVRNYQSWIGEAGVIDFNGLLRGSGNKQGAHVAEIRVNLLNKADRSKTSIAIVR
ELRPTLQAMAARYPGSTVQLVEDPPGPPVRATVLAEIYGKDLQQLRTLSAQVKAAFQQ
TRDMVEVTDSEAQDVHQYRLTVDREKAALSGLSVAEVAVALRRLIDGEEMGRARIAGE
KNPVPIRLQIPRRHQIDPALLARVSVTNRQGQRVPLSEVVQVVPGSVDRAISHKDGER
VTYVGGELESTAPVYAVLDLDRRLDGLLLADGSRLTTGNLRLNPVAPDTLEGPRLLWD
GELRMTLDTYRDMLGALGLALTFIFLVLVAYYRSFSLPLVAMAAIPLGLAGIFPGHWL
MGPPFTATSMIGIIALAGVVVRNSLLIIDFVLDYRRQGMDLREAILEAGAVRLRPILL
TALAIVLGSAVMLSDPVFGGLAISLIFGTLASTVLTLIVVPLLLYLLLRYKDQNEASL
sig_peptide
/locus_tag="Pnap_4181"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.973) with cleavage site probability 0.821 at
residue 37"
/locus_tag="Pnap_4182"
/locus_tag="Pnap_4182"
/note="PFAM: outer mem
KEGG: pol:Bpro_5561 outer membrane efflux protein"
/codon_start=1
/transl_table=11
/product="outer membrane efflux protein"
/protein_id="ABM39467.1"
/db_xref="GI:"
/db_xref="InterPro:IPR003423"
/translation="MNRSIKIRGLLPLAALAAALLAGNAAAESLQQAWDIALTVDRGL
KASRESTAAASSLLDAAKSARLPNLALEAGYTALDKAPAARVDFFGQSLQMPLAQKDS
AAYRAMATLPLYTGGRIERGIDAATAGMDAARLGETADAQNLKLRVADAYVNVLRASR
MLKVTESHVASLQAHARDVGNLHEQGMVAKSDLLSVQVALADARQRHLQVANGLDLAR
AAYNRLLGRPLDQPVALDDLSPETAQEPLPALSERALARRSELAALARQIEAMRHQAA
AVRGETAPQVALSGGYGYQENRYQVHQGQWMVTLGVKWSLFDGGVVSHRANAVERQAA
ALTEQRDELASIIALQVRQTWLDVQETRKRLIVTQSAIAQAEENLRVARDRYANGLST
HTEVLDAETLRTGSEGNHANALSDAALAGLRLKRATGEL"
sig_peptide
/locus_tag="Pnap_4182"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.995 at
residue 28"
/locus_tag="Pnap_4183"
complement(5)
/locus_tag="Pnap_4184"
complement(5)
/locus_tag="Pnap_4184"
/note="PFAM: helix-turn-helix- domain containing protein,
KEGG: bur:Bcep1 transcriptional regulator, AraC
/codon_start=1
/transl_table=11
/product="transcriptional regulator, AraC family"
/protein_id="ABM39468.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000005"
/translation="MHITNVRVTYLRQIADQAVELGVDLAAWLAISELKERDLVDATA
LIPIEKLGELVTAAIARSGESGFGVLAGCRLIPGSHGIVGMAAAASANIREAMQIVER
LVSLRTGVIDIRTRVANGAFEVFFEPVLGLGPASNPVTEIAMVAVKNIADDLIHHGSA
CSRVGFSFPEPPHSALARDIFGCQVQYGQKWSGLSFALSAAEEDVPKHDALVLAEAVR
ICTDEFKTLRSNKSASARLEGVILERSPSFPTLTFCARLLGMTPRTLHRRLIEEGTSY
REVAESVRHRMALELLRKKVTVKEVAYLLGYTEIANFRRAFKRWEGVAPSDWFGQNTK
/locus_tag="Pnap_4185"
/locus_tag="Pnap_4185"
/note="PFAM: oxidoreductase FAD/NAD(P)-binding
f Oxidoreductase
KEGG: bur:Bcep1 fatty acid desaturase"
/codon_start=1
/transl_table=11
/product="oxidoreductase FAD/NAD(P)-binding domain
/protein_id="ABM39469.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001221"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR001709"
/db_xref="InterPro:IPR001834"
/db_xref="InterPro:IPR005804"
/db_xref="InterPro:IPR006058"
/db_xref="InterPro:IPR008333"
/translation="MRSLLRRSSHEAEINGKTITVQPDETLLLAALRQDIHIPSICRV
GGCGTCKCKLKGGKVEELTETAYLLSEKEIADGFILACQSRLRSDVKIELDQEGAIDG
PPVKGVVVGKQMLTHDIARIDIRLDQPIRYRAGQFAEVALPALPDCSRSYSFSTAPGN
DRQVSFTVRRVPGGRVSGHLVDKAQVGESLTVRGPGGQFWMRPGQAPVLMVAGGSGLA
PILAMLEDMKNRGDLRPVTLLFGARAQRDLYALDELAAYSASWPNFRFVPILSEADAS
QAWEGRTGLVTEHIPELLGSATSAYLCGPPAMIDSAVAVLRKQGITDEHLHADRFVDQ
APKLHTGFYGTVGLPEVERAPANILDYLKFFLVHLVGVGGVLSILAGGVYTSLGLLGL
LMFYIGGDALLGRDTRTPEYRSPWILTVQLWLALPLLALVMFSYIWTLSPGDPLGFGA
WISGLTGYDVLAARAGTGFWHHLAGGVHAGLTIGLLGTVTGHELTHRTWDPVSLLVGR
WLLAFSYDTGFAIEHVYGHHRYVSTEHDPATAPRGRNVYFHVVASTIKGNISAWRLET
ERLMRKHHEVLSPRNAYIRGVLMSVLLVAIAGWMAGWSGVLAFTGCALFAKALLEIVN
YMEHYGMVRIPDQAVQPRHSWNTNARMSSWAMFNLSRHSHHHAQGEVPYQDLMPLSDA
PMMINGYLATIVFTLVPPLWHRLMTPKLIEWDRLYATPEERALALRANQRSHLKALRD
YDPRRWNTAAAH"
/locus_tag="Pnap_4186"
/locus_tag="Pnap_4186"
/note="PFAM: glucose-methanol-ch FAD
KEGG: sil:SPO0190 oxidoreductase, GMC family"
/codon_start=1
/transl_table=11
/product="glucose-methanol-choline oxidoreductase"
/protein_id="ABM39470.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000172"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR007867"
/translation="MNFDYVIVGGGSAGATLAARLSEDPSTSVCLLEAGGRGDGILVR
APAGMVAMMPGRGKINNWVLHTVPQPGLNGRRGYQPRGRALGGSSAINAMLYIRGQRQ
DYDHWANLGCDGWDWESVLPYFKKSENNERGPGAFHGGSGPLHVSEQRSPRPITLAFI
EAAKHCGIAPRADFNDGDNEGVGLYQVTQFHDAARRGERCSTAAAYLHPLRRQRPNLT
IKTNTRATRIIFEGKRAVGVAYRSAGREQEIRAKQEVIVAAGAFGSPQLLQLSGVGRP
EDITHHGIRMVHELPGVGQNLQDHLDFIHAFKSKDTDNFGIGLRGTMNLLGHIAQWRK
DGSGMLATPFAEGATFFKSDPGIDRPDLQLHFVISVVDDHARKLHAGYGFSCHVCYLR
PYSRGEVFLQSPDPLDDPGIDPRFLSDERDLKALMHGAKVTREILLAPPLKKYRHREL
FGMTDGMNDAQWEQHIRSRADTIYHPIGTCKMGVDAMAVVDPELKVRGLQGLRVVDAS
VMPTLVSGNTNAPTIMIAERAVDLIRGFATRYSTAIRN"
/locus_tag="Pnap_4187"
/locus_tag="Pnap_4187"
/note="PFAM: AMP-dependent s
KEGG: sil:SPO2045 medium-chain-fatty-acid--CoA ligase"
/codon_start=1
/transl_table=11
/product="AMP-dependent synthetase and ligase"
/protein_id="ABM39471.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000873"
/translation="MLGKMMREPLLVSSLIAHAASYHADTEIVSVQTTGGVEKTTWSQ
VECNARRLSSALAKLGVRQGDRCATIAWNNRRHLEIYFGVSGAGMVCHTINPRLSFEA
LTYIVNHAEDRVLFVDRTFLPIVAKLRPALNTVKHVILMGPRETEAQGMVDDLLFYDE
VVTTGDQDSQWPNFDEDLPSSLCYTSGTTGHPKGVLYSHRSTMLHALAGNHPDGLAIS
ARDTVMPVVPMFHVNAWGVPYIAASQGAKLVLPGPNLDGASLAALIDAEEVSLALGVP
TIWMGLLAALRARGTKPKSLKRTVVGGSALPPSMFAAFRDEFGVELIHAWGMTETSPL
GTLNQPLARHAHLDPQSQSDLRLGQGRPPYGVQLRLVDNLGTVLPCDGKTQGSLQIKG
HWIVDTYFGATTSALTADGWFDTGDVATIDANGYMIIRDRAKDIIKSGGEWISSVEVE
NIAIGHPAIANAAAIGVPHPKWDERPVLVAVKKEGATVSDADVLAFFKEKVPDWQIPD
KVVFVDALPLSGTGKVLKNKLRESYKDLLTVDRAESA"
sig_peptide
/locus_tag="Pnap_4187"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.814) with cleavage site probability 0.784 at
residue 25"
/locus_tag="Pnap_4188"
/locus_tag="Pnap_4188"
/note="KEGG: ade:Adeh_1143 aldehyde dehydrogenase"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="ABM39472.1"
/db_xref="GI:"
/translation="MENSHLPNTEVQAALDQDLQALEAAKHAWARTSVADRIAILGRI
KQTLMQVAQGWAETAARKKRIPHGSPLAGEEWISGPYSVMAACNGLMQTLSQLKRKEF
LAHLHMRRLKNGQLAVGVMPHSVWDSLLLSGVSAEVWMQKGVSEVNVDEHAAAAYDVP
VDQRSGKVALVLGAGNIAAISPLDAFQKLFIENQVVLLKMNPVNDYLTDYLRAALRPL
IECNALRIVRGDGAVGAYLCEHPRVEEIHITGARATHDAIVWGVGEEGLRNKAANTPK
NHRKVTSELGAVCPTIVVPGPWSRADIRFQAEQIATQKLHNSGFNCVACQTLILPQGW
AHTEPLLAEVGRVMSRNGQREAYYPGNEHRTADFAAHAGRSDAIERGPGAPPCVLADM
DGGDEPWLAEHEVFGTALAMKSLAYQDAESYLKAAIDYANNRLYGTLGANILIHPKTL
RQIGQQRFEELLRELRYGTIAVNAWTGLAFLLAPCPWGGFPGGMAIDPQSGVGTVHNS
FMLEKTERTVVFAPWRPFPRGLFSLQFTLLPRPPWFITNRRQHELGRLLTDFQFRPGW
TKLPRIFINALAG"
/locus_tag="Pnap_4189"
/locus_tag="Pnap_4189"
/note="PFAM: OmpW
KEGG: pol:Bpro_5480 OmpW"
/codon_start=1
/transl_table=11
/product="OmpW family protein"
/protein_id="ABM39473.1"
/db_xref="GI:"
/db_xref="InterPro:IPR005618"
/translation="MPKTKTTYAFAFAAGLTLAFGSIGAYAQSEDAANTLKIGYAGIT
FNTKSGHLIGPPGTTPPGIQTDLRDARTFALIYERRISGPWSVVVQAATPPVVKVDGA
GTGAPLGSVETTKAWFPAVLATYTFAGLPGIRPYVGAGVNYAFFTDPQVSAAYTGAFG
GTSSSSTLKNSWGPVVKLGAEFPIAKNWVLDVGYSRYWIKTTATITTTTPGVGDIART
INVKVDPGVFGLLVGYRF"
sig_peptide
/locus_tag="Pnap_4189"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.945 at
residue 28"
/locus_tag="Pnap_4190"
/locus_tag="Pnap_4191"
/locus_tag="Pnap_4191"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-
KEGG: rme:Rmet_1336 transcriptional regulator, LysR
/codon_start=1
/transl_table=11
/product="transcriptional regulator, LysR family"
/protein_id="ABM39474.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/translation="MELRHLRCFIAVAEELHFARAAERLHIEQSPLSRAIKELESNLA
VQLFERTTRRTRLTWAGKVFLEEAHRVFAAIDQAKASVKAAATGYRGRLRIALSDGIA
QPRLSALLAQCREEEPEVEIRLSETPLSQQIKGLNSDLYDAGFAQSDEVGEGIIAEAI
WSEPLVIAVPARHPLLVHRRIPLDEVLRYPLVLCHPETCEGFWQQVKRVLRTVDAKPI
VVDRVPTLDLMMTLVAAGYGLGFAGESQIAACRNPDVIARPLAGRSPMLTTYLLRPEI
EPSEQLSRFIDRVSPVDEQASNPATVQ"
/locus_tag="Pnap_4192"
/locus_tag="Pnap_4192"
/note="KEGG: bte:BTH_I0809 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39475.1"
/db_xref="GI:"
/translation="MKMIAALMLVLQLTACGQSAPTETVESLAANPERLKELRAQCKA
DRAKLGDALCNAVAEATHKRFIGNGTPYTPEPTPKN"
sig_peptide
/locus_tag="Pnap_4192"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.959) with cleavage site probability 0.473 at
residue 18"
/locus_tag="Pnap_4193"
/locus_tag="Pnap_4193"
/note="PFAM: TRAG
KEGG: rso:RSc2586 probable plasmid conjugation traG
transmembrane protein"
/codon_start=1
/transl_table=11
/product="TRAG family protein"
/protein_id="ABM39476.1"
/db_xref="GI:"
/db_xref="InterPro:IPR003688"
/translation="MQGTSVLFGQVLTVFGIVLAGVWGATQWTAAALGYQLRLGTPWF
DFFGTPVYHPWRLFEWWFFFDAYAPHIFNTGGSIAGASGMVSVVVAIGMSIWRSRQSK
LVTTYGSARWADAKEIRKAGLTNPAGVFLGLHDDQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPASAVIHDIKGENWNITAGWRSRFSHCLLFNPTDPKSAAYNPLLEVRRG
AHEVRDVQNIADILVDPEGALERRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFL
SDPACPFEVTLHRMMSTRHLGESTHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYR
DPTVAEVTSRCDWRIADLISAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESL
DGSDGVERKHKLLLMLDEFPALGRLDFFESALAFMAGYGLRAFLISQSLNQIDKAYGQ
NHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRNYAGHRLAPWLGHLMVSRQ
ETARPLLTPGEVMQLPPDESVVMVSGHAPIKAKKLRYYLDANFKRRVLPPPALTLGRY
ADVPAARADDWSALAVPTVSAASATAGLGESLDDGGPRQQPELSEVATYSPEPDQSAS
DLSLLDDDDFPLPLPNQLDPRLQRTARLAALDPDDGIQL"
/locus_tag="Pnap_4194"
/locus_tag="Pnap_4194"
/note="PFAM: CopG domain protein DNA-binding domain
KEGG: rme:Rmet_1549 CopG-like DNA-binding"
/codon_start=1
/transl_table=11
/product="CopG domain protein DNA-binding domain protein"
/protein_id="ABM39477.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002145"
/translation="MTQARLNLFIQPDHAKRLDELAAKKGVSKSSIVAAALASWLSPD
AGDQREAATAKRLDRLSRQFERLERDQNILIETLALYVRYYLTVSTPVPEAHQEAAKA
QGKARFEQFIEQLGRHVLRGRSLVKEVYEEIQPDAARLAEAAMQEDGA"
/locus_tag="Pnap_4195"
/locus_tag="Pnap_4195"
/note="PFAM: type II secretion system protein E;
KEGG: rso:RSc2584 probable conjugal transfer protein TrbB"
/codon_start=1
/transl_table=11
/product="type II secretion system protein E"
/protein_id="ABM39478.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001482"
/translation="MSAVLKDQPPSSAATSLDRRIRMLRTAMGPLIAAALEDPDVVEI
MLNPDGSLWIDRLSSGRSPMGVKLSEADGERIIRLVAAHVGTEVHRGQPLLTAELPET
GERFEGILPPAAPGPAFALRKRAVSIIGLERYVADSILSEEQAEFLRRAVRERLNILI
AGGTSTGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVSLRTRAGVVSMAELV
RATMRLRPDRVIVGEVRGGEALDLIKVWGTGHPGGIATIHASSAHGALLRLEQLILEV
ALTPPRALIAEAVNVIVFIAGRGRGRHVQTIARVVGFDVHGYQLDDALAPPLPTLSLP
SSTTPGELP"
/locus_tag="Pnap_4196"
/locus_tag="Pnap_4196"
/note="PFAM: Conjugal transfer protein TrbC;
KEGG: rme:Rmet_1551 conjugal transfer protein TrbC"
/codon_start=1
/transl_table=11
/product="Conjugal transfer protein TrbC"
/protein_id="ABM39479.1"
/db_xref="GI:"
/db_xref="InterPro:IPR007039"
/translation="MTHIAFSTSRFSANPHLRLTLHVVVLAALMLCLTLPAHAAGSSM
PWEGPLTSILESIQGPVARIVAVIIIISTGLALAFGDTSGGFRKLIQIVFGLSIAFAA
SSFFLSFFSFSGGAVVA"
sig_peptide
/locus_tag="Pnap_4196"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 40"
/locus_tag="Pnap_4197"
/locus_tag="Pnap_4197"
/note="KEGG: rme:Rmet_1343 putative conjugal transfer TrbD
transmembrane protein"
/codon_start=1
/transl_table=11
/product="putative conjugal transfer TrbD transmembrane
/protein_id="ABM39480.1"
/db_xref="GI:"
/translation="MSTETEFAQGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLA
AAVGLGLQLWIPGLVLWIVGHSLAVWGARLDPQFMAVFSRHIKHRPLLDV"
/locus_tag="Pnap_4198"
/locus_tag="Pnap_4198"
/note="SMART: AAA ATP
KEGG: rme:Rmet_1553 ATPase"
/codon_start=1
/transl_table=11
/product="AAA ATPase"
/protein_id="ABM39481.1"
/db_xref="GI:"
/db_xref="InterPro:IPR003593"
/translation="MMNLAEYRKRPALLADWLPWAGLVAPGVVLNKDGSFQRTARFRG
PDLDSATQGELIATSAQLNNALRRLGSGWALFVEAERRAAADYPYSDFPEPLSWLVDE
ERRASFEEDHSHFESGYHLTLAYLPAEESRVRAAKLLYENTPQRGVDWRERLESFISE
TDRFFDLLDGVMPEIVWLDDSQTLTYLHATVSARRYRVAVPEHPFYLDALLADSALVG
GLAPMLGDQHLRVASVRGFPTSTWPGLLDDLNRLGFAYRWSTRFLCMDKADAETELGR
LRRQWFAKRKNVVALLRETIFQQESPLVDTDASNKANDADAALQELGSDQVAFGYVTA
TVTVLDPDSSVADEKLRRIERVIQGRGFVTIPETLNAVEAWLSSIPGNAYANVRQPII
STLNLAHLMPVSAVWAGPERNNHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVVGPT
GMGKSVLLATLAMQFRRYPGSRIFAFDMGRSMRATTLGLGGEHYDLGKGWEEGGEIAF
QPLARIDQDGYRTWAAEWLEGRLLHEGAAVGPEEKAMVWSALGSLAGAPVEQRTLTGL
SVLLQSNALRQALQPYVLGGAHGKLLDADSDRLGSGSVQCFEMEELMHSKAAVLAVLG
YLFARFDERFDGAPTLLILDEAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLAD
IQNSSIAPAIVESCASRIFLPNPQATEPQIRTIYEGFGLNRRQIDIVAEAVPKRDYYY
QSRLGNRLFDLDLGPVTLAFAGASTPQDQRDIDAVSRSESSSDFAAAWLRHRGLDWAA
DLVPSFPSIPQENAP"
/locus_tag="Pnap_4199"
/locus_tag="Pnap_4199"
/note="KEGG: rme:Rmet_1554 putative conjugal transfer TrbJ
signal peptide protein"
/codon_start=1
/transl_table=11
/product="putative conjugal transfer TrbJ signal peptide
/protein_id="ABM39482.1"
/db_xref="GI:"
/translation="MKKTILAIAAAALVTLMPVAHAQWVVIDPSNLAQNIMTAARTLE
QINNQIRQLQNQAQSLMNQAKNLTGLDFSALNELRASLSATNQLIQQAQGLAFNVSQM
ETEFQRLYPDAYSASISGTQMTTDARSRWRNSLEALRTATKVQSQAVQNFASDEQTLT
DLVNRSQSAVGALQATQATNQLLALQARQSIQAQQLQITQDRATALEQARVIAAQERA
REVRRRFLGEGTPYTPQTIDFYRN"
sig_peptide
/locus_tag="Pnap_4199"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 23"
/locus_tag="Pnap_4200"
/locus_tag="Pnap_4200"
/note="PFAM: TrbL/VirB6 plasmid conju
KEGG: rme:Rmet_1556 TrbL/VirB6 plasmid conjugal transfer
/codon_start=1
/transl_table=11
/product="TrbL/VirB6 plasmid conjugal transfer protein"
/protein_id="ABM39483.1"
/db_xref="GI:"
/db_xref="InterPro:IPR007688"
/translation="MNDISVIDRFLNVFSRYIDSGFGLLGGEVAFLTATLVAIDMTLA
GLFWAMSHASGGGDDIIGKLIKKVLYVGAFAYIIGNFNLLAGILFRSFAGLGLVASGS
TITQAEFLQPGRLAKVGIDAGAPILEQISAMAGFPEVFVNLDAITVMLLAWLVVVMSF
FVLAVQLFVTLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIV
GIGTGLFAEFQVTPDEPSIDHALTIMLAALAMLGLGIFGPGIATGLVSGAPQLGAGAV
AGTALGVAGAAVAVGAAATGVGGAVAAGARMAPGAAKMAASGARSMASTASSAKSAFQ
AGSAGAGGGLKGAAAGLGNVAKTGAQSVGQKVAAGAKSMKDRTAAAIKPDASASGTGA
GAGAGSAAQGGNDAAPTDTQQPAWAKSLHRRQQISHAASTVAHTLRGGDGGGSGSSPS
/locus_tag="Pnap_4201"
/locus_tag="Pnap_4201"
/note="PFAM: Conju
KEGG: rme:Rmet_1348 conjugal transfer protein"
/codon_start=1
/transl_table=11
/product="Conjugal transfer protein"
/protein_id="ABM39484.1"
/db_xref="GI:"
/db_xref="InterPro:IPR007665"
/translation="MRFKRSLVRYADTPQPATPYQSAEQVWDDRIGSSRVQAKNWRLM
AFGCLVLALLMAGGLVWRSAQSIVTPFVVEVDSGGQVRAVGEAATPYKPNDAQTAHHL
GRFVTLVRSLSIDPIVVRQNWLDAYDYTTDRGAAVLNDYARTNDPFARIGKESVTVQI
TSIVRASEASFNVRWTERRYVNGAAAGLERWTAVVSIVLQTPRTEERLRRNPLGIYVN
GLSWSRELDSSEGAKP"
/locus_tag="Pnap_4202"
/locus_tag="Pnap_4202"
/note="PFAM: Conjugal transfer protein TrbG/VirB9/CagX;
KEGG: rso:RSc2576 probable conjugal transfer lipoprotein
/codon_start=1
/transl_table=11
/product="Conjugal transfer protein TrbG/VirB9/CagX"
/protein_id="ABM39485.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR010258"
/translation="MKPSLRIYVFLSLLVATSMTLSGCATPGKPPPTITLDEPVAAQP
LPELPKPVEVVAVPQPLPLPEQLKLLPDELEAKTAPESADEKVRVTRANQEARIAPTR
EGYVNAIQVWPFTDGALYQVYASPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGA
GASLRVSVLVKPTRSGLKTNLVVTTNRRTYLIELTSTEKAWMASVSWDYPKDRMLALQ
RQAQAAQIAAPVDAGLSLEKIRFRYAITGSNPPWKPLRAFDDGEKVYIQFPGGIAQGE
LPPLFVIGAQGDGQLVNYRFRSPYYIVDRLFGAAELRLGADKGDVVRIERTDGTVSGT
sig_peptide
/locus_tag="Pnap_4202"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.996) with cleavage site probability 0.592 at
residue 26"
/locus_tag="Pnap_4203"
/locus_tag="Pnap_4203"
/note="PFAM: conjugation TrbI
KEGG: rme:Rmet_1559 conjugation TrbI-like protein"
/codon_start=1
/transl_table=11
/product="conjugation TrbI family protein"
/protein_id="ABM39486.1"
/db_xref="GI:"
/db_xref="InterPro:IPR005498"
/translation="MSQANNAPDTPDSAVPDVPPKVAPENVTLRSQPRPVTRLNRRML
AVLAGGLATAVLGGTIWSLQSTQRRGAGDQKELYNVDRVSRSEGLDRLPADYSKLPPT
LPAPVPQLGAPLPGDLGGPIHKAEQQAQGYGYQQPGHDPAEVERLARLKQAEEAAASS
VFFRSGGQKVAAAAQPQALPVATALAANAAFDPMAAGPASTAAQSADPTAVQNRQDQK
EAFLSKAGSTETRNSGSLQMSASPYQVMAGTVIAAALVTGIKSDLPGDVIATVTEPVY
DTATGKYVLIPQGSRLLGKYNSQVSYGQSRVQVVWNRVILPDTSSFQLDKLIGTDPAG
YAGLEDGVDWHWDRVFAGAALTTLLGIGAELAAPENRNGGDRVIIAGRDSLKDSVNQA
GQEMTRRNMNMQPTLTERPGLPVRVIVNRDLVLRPYQPLFFVRGGLR"
/locus_tag="Pnap_4204"
/locus_tag="Pnap_4204"
/note="KEGG: rso:RSc2574 hypothetical/unknown protein"
/codon_start=1
/transl_table=11
/product="Uncharacterized conserved small protein-like
/protein_id="ABM39487.1"
/db_xref="GI:"
/translation="MSTPTKKLRLGPLPSITSTKLTFTCPASLKADLDHYAALHAQAY
GETVDAVTLIPHMLEAFMAGDRGFKKRNTSKPTLQKSPQREATPP"
complement(8)
/locus_tag="Pnap_4205"
complement(8)
/locus_tag="Pnap_4205"
/note="PFAM: protein of unknown function DUF805;
KEGG: chu:CHU_1014 possible cytochrome"
/codon_start=1
/transl_table=11
/product="protein of unknown function DUF805"
/protein_id="ABM39488.1"
/db_xref="GI:"
/db_xref="InterPro:IPR008523"
/translation="MIWFLDAMIKYAVFQGRARRKAYWMFLLFVILISFFMGLILAII
QSVLHLGVDLAGIANIGFSLAILIPSVAIGVRRMHDIGRSGWRLIVPFLGWFMLCMDS
QPGENKYGPNPKTS"
complement(8)
/locus_tag="Pnap_4206"
complement(8)
/locus_tag="Pnap_4206"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39489.1"
/db_xref="GI:"
/translation="MPADGQTSFIVKLPMNLDATHALLWVHLFKIGRIVMSKAMAIWL
GLKSQRLIDTIDAVQVYLCVTDAVNDAMDVLISSWKSPLHTFADAFGIELAYGMPPAI
AHVALSQNGLSPEEIKVVLTASEKALLSVIGPLPI"
complement(8)
/locus_tag="Pnap_4207"
complement(8)
/locus_tag="Pnap_4207"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39490.1"
/db_xref="GI:"
/translation="MHVLSRQLDDQCSSLSPPITRQKTNFPIGIHDQKVTSEKEPQPV
DKSIKKYPMGLFYVSYVLVVGAMFLKFPIHSLIIGIVFLVLSVTMICRSQKPFVEPVF
EVDLDEDDSCSLVGRNAQQQEFDYDFFDFENARINSNLGQQKAILEINK"
complement(8)
/locus_tag="Pnap_4208"
complement(8)
/locus_tag="Pnap_4208"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39491.1"
/db_xref="GI:"
/translation="METNYRMRPIAAEITHGWIARALSSKFRVTYSSGRFGDTHYVIK
DGVGGHVVLTQNTKNGRNVDASLFSPLQHAIMEKLQGWGLVVAAE"
/locus_tag="Pnap_4209"
/locus_tag="Pnap_4209"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39492.1"
/db_xref="GI:"
/translation="MGVSLLFQGNVMAHPKTAQSVSKKPVRVISPRVTIFRPGFTEVD
EWRSALPNEALHVFSNFTGSLDAPEVMPAGGMRKSAYGGKTLFAFRSL"
/locus_tag="Pnap_4210"
/locus_tag="Pnap_4210"
/note="KEGG: rfr:Rfer_4310 hypothetical protein"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein"
/protein_id="ABM39493.1"
/db_xref="GI:"
/translation="MELHSNELRDYILRAPKRWTFNGCEMVNNSEACYRWLEQLCRGT
LDQRINRRAGLVEKWFPYWRTPTMKSIKRHHDREHIKKYGYFINR"
/locus_tag="Pnap_4211"
/locus_tag="Pnap_4211"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39494.1"
/db_xref="GI:"
/translation="MQETKTVLSEYTQMSPFIKSDTKVCWDCLRAKPLRELKPYNPVP
GLLVWQCGCGQSALPPFMTVAGGKVIICEDLTGDSLPDEWTGVCVSGNDAKSFWYIGH
DLGERSFNKLPLEIVTIKGAVAYVENNAACKNTLAMTDAAIAVWKAVECAQAVVCESL
PENLPKDWLVMNAPRPILGDQIAQGAFMHGVYYAAINPSVEFAQDLVRRNLINDARVV
FVASKVTQEAMALETISPEYQNAYRKMPDHNRANAISSFVLKLNRGKTYCEIKELARR
AYVAMQEEELLKVVPTA"
/locus_tag="Pnap_4212"
/locus_tag="Pnap_4212"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39495.1"
/db_xref="GI:"
/translation="MNIQNIKRNSMGTLDFDGKFDGMRKPQDFITYPIGANDDKTRVK
IQSDTRIGFINLTNGHVLMSPSIKGGAYNHHLSQINDVGKLNQEELFSLKAQLLDSAS
AKAGTNGIVTTDNSGAAEVFAKQP"
/locus_tag="Pnap_4213"
/locus_tag="Pnap_4213"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39496.1"
/db_xref="GI:"
/translation="MKTMTEAEWDATHDDFKKLWTAERTDWTDWERVRNRYMGKRTVM
SDGVLLVEGMGLVITPNPPKSKDDKVYLRDIGRALEKNIYAQTDTSLHWLAVIGEDSI
QPVPTKEWYYNDALIQVGVVNGNSEGSLIYVQAQKNRYQPELLVPLFRIKLLCSPMAA
FAEAKIVYEFFESQEFMDMVSHT"
/locus_tag="Pnap_4214"
/locus_tag="Pnap_4214"
/note="PFAM: phosphoadenosine phos
KEGG: pol:Bpro_5428 hypothetical protein"
/codon_start=1
/transl_table=11
/product="phosphoadenosine phosphosulfate reductase"
/protein_id="ABM39497.1"
/db_xref="GI:"
/db_xref="InterPro:IPR002500"
/translation="MISKPLEVTMQQKIFTTFSLFQDEEADDLKSELIRINELIARGA
IFVVNHSGGKDSQAMFHFITDLVPRSQIFVVHAELPEVEWEGVLEHIQSTVLGMTVHT
CRSRRMLLEMIRERGMFPSPSIRQCTSDLKRGPIERTIRRTGHKLIVNCIGLRSDESS
NRAKLATFKYSEKNSKNDREWYDWLPIHHWTVEAVFAKIKATGQVPHWAYSVGMSRLS
CVFCIMASTKDLTIAAQHNPKLYSTYVGLEHTTGQVMMMPSKSKGRQTLEQITGVIAE
/locus_tag="Pnap_4215"
/locus_tag="Pnap_4215"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39498.1"
/db_xref="GI:"
/translation="MSSEYIYDRAAVRLKGVRFEYIALYILSHSNNVDPYIPNWNLYG
FSKLEDALDIPLKYCYYCDDGITRGKKGQMISGEFDINKWRVAIERAPIIKDEFRLQL
KFCDEKHSESHPLLKLEKIKAFAVQLDLHLEIESILGHSEAAWLVLDLNNPEHVDLAW
ATTRDMSDAESNDSYKRLMLPFNFLQRQVAERFFGHLGYCDEKRASATVLRKQSNFDL
PETIYKFEFPVDDQPVYKDVRFVVVNWLGRILSCSPDRWFCLKLIELEKKHLGTAESA
YIKFKKHMKALQVTSHEGMTIEVMASLSGAQRAEMTQWDMDKRDRLFARLHKPGMSAI
FTEVVKDHIQAMALAPYIECNLAISEMKTAKKPQVEQMTFDI"
/locus_tag="Pnap_4216"
/locus_tag="Pnap_4216"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39499.1"
/db_xref="GI:"
/translation="MRIIQGFPFRTDGGVNTQLEGGQCIIGADGSTCLGELVADEEFT
SKVITALNQHEKLEVPRFILLSILEMAESNYQDVSTGLDDGTYTAIENPNFIVHGQAL
DYFKGLLNSHVKIAAIAA"
/locus_tag="Pnap_4217"
/locus_tag="Pnap_4217"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39500.1"
/db_xref="GI:"
/translation="MTSTRMFEVIIAGSNGQLPIAYPNSNGLDALKVMRALSTQGFRS
TAETTALGITERLGLADMEAIYADQLDSALDDVQCLVERITQDIARLRDITIDPMNIV
FGDNPAFEIRPASDGNLFNVLNKERGNVSVHYIHEGVKCDVFAQDSLEPIDTVSVQTT
ELVKLMESKIIT"
/locus_tag="Pnap_4218"
/locus_tag="Pnap_4218"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39501.1"
/db_xref="GI:"
/translation="MNTRKAHGIPSQINSFVSDKETEMTGYGRHNRLLVFHSNEKRAL
TLREDLSKGLAMSTEEDRIKVLNGFQRMHPLGARPVSSGPSIPYQSAFGSSVEHVYAY
/locus_tag="Pnap_4219"
/locus_tag="Pnap_4219"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39502.1"
/db_xref="GI:"
/translation="MAKIVNLQVLIDGDNDEEITEFLRVALMTARPDGSSTIEILDFH
VASIDQPTDELTDSIVNETYLTGQAFDSWLIYSASEAKATGEPNDGYWSYQYGWTSRD
LATRFEPVARDMPHSAGNDACMIIDI"
/locus_tag="Pnap_4220"
/locus_tag="Pnap_4220"
/note="PFAM: histone family protein nucleoid-structuring
protein H-NS;
KEGG: bpm:BURPS H-NS histone family protein"
/codon_start=1
/transl_table=11
/product="histone family protein nucleoid-structuring
protein H-NS"
/protein_id="ABM39503.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001801"
/translation="MENPIDEVVKLNQQIAELQKKSEELKKKNRPVVVAELRERMAAY
GITAQELTRPVPKARMLKEDFATPIKAVKGKIKSSPLPAKFRSPDGKNEWSGRGMAPK
WMNTLIEQGHSRDEFLISKDAPAQDKAAESAKA"
/locus_tag="Pnap_4221"
/locus_tag="Pnap_4221"
/note="KEGG: rme:Rmet_1504 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39504.1"
/db_xref="GI:"
/translation="MEAHEVLPGVHRVASLVKRWLLGTHQGSFSADHMQAYLDEFAFR
FNRRGSRARGKLFYRLLEQSVAMIPSPFGTSSPTQTPQKRGKSDLSHPALAGLRLRRS
TWKSTSAHGAAELPHLSGYPANLMALTCSSPLSSSNFSLRKVAHRVN"
complement(9)
/locus_tag="Pnap_4222"
complement(9)
/locus_tag="Pnap_4222"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39505.1"
/db_xref="GI:"
/translation="MVLPYETMVSSFAAQDDIKEFLEFLGASDVLFGFDSNMDCSVQW
SRKDEVSNFPLNANGYIAMWMRARPWKRRPVVSERLNEQQEIELAVINFWYVLRDFVF
SEVPKRIFDQEKMLKVSEQQTQLLVKRMTLGTSA"
complement(9)
/locus_tag="Pnap_4223"
complement(9)
/locus_tag="Pnap_4223"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39506.1"
/db_xref="GI:"
/db_xref="InterPro:IPR011528"
/translation="MISFQSIHRNQIMCINNSEAQAANYLTTAFKRTFDDVRVLTGVV
LPLPEGARLATAEYDCIVICNAGVYLFEVKGWNQCLVGREKVEAGHQWYLEQANGDRK
HVNDPVAQGSEKFQAMKGYLDARIAIKYYVVLPGTDVQISPTLPATILTAQDISYIPR
LCNSATKASKMYQKLDRETVALLADYIKEKSGVLTLNEHIANCNRFQLQKKAARHASG
SGLMAISVAPACCD"
/locus_tag="Pnap_4224"
/locus_tag="Pnap_4224"
/note="PFAM: type II secretion system protein E;
KEGG: rme:Rmet_6302 type II secretion system protein E"
/codon_start=1
/transl_table=11
/product="type II secretion system protein E"
/protein_id="ABM39507.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001482"
/translation="MHNREHIEGQIALYLHPIKSILEDAEVSEIMVTADGCVWVEKRG
NIENSGVVLTEEKRKLTLINVAKAVGRDMLANTANAIVSTSVGGLRFAGALMPIDERG
TTLCIRKHLDPDKRPSLEQLVEWKMLTAEQAELLVRLIIVEKKNAVFLGPTSGGKTTL
ANAVLGKIPSYERIGSIEDAHELAIRVANKDCYLTNPQIGITSRVLIQHAMRSRYDRL
ILGESRGEDTFDLIRALSSGHNGSITTIHGSSAREGLGTLEMLYQMSVPEGSNIPVET
ARGYIAAAINLLIYTERRYEPADGGVFKSVRSVKEIALVKGIKNGEYEIDYL"
/locus_tag="Pnap_4225"
/locus_tag="Pnap_4225"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39508.1"
/db_xref="GI:"
/translation="MVNMKSITSKRLKTAAVIALALVAGPVFAQSADTTGLCNLVSFI
KSIIGTVAVLAILLYVINSFFGKSALIGEIIEKVLIGCVVAVGATFLVTKTGLVVSCS
sig_peptide
/locus_tag="Pnap_4225"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.869 at
residue 30"
/locus_tag="Pnap_4226"
/locus_tag="Pnap_4226"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39509.1"
/db_xref="GI:"
/translation="MASVDYPVLRRPRLRGGIGGNTAVLIWAITGMVGLVIGLPEGLF
VIIPALLIQGVMLWAFRTDHKVMEVYALYATLPDEFEAGIPAADSKKSSRPQFFGKGV
/locus_tag="Pnap_4227"
/locus_tag="Pnap_4227"
/note="KEGG: pol:Bpro_5229 type IV secretory pathway VirB4
components-like"
/codon_start=1
/transl_table=11
/product="Type IV secretory pathway VirB4 components-like
/protein_id="ABM39510.1"
/db_xref="GI:"
/translation="MVIALKKEASESKSSHSELLPWLCHASPDWILCKDGSLLSGMEY
RCLDIDNISEHTLKKALLELQASLKTLDERFYVWWTIDKKRDSTRHKSNFPNDAAQKL
DDLIGKALDAGKMFNITYRMYILYTGETGMYAYMDNVRRLVNEENTSVITAMLKSLNP
ATFTSASALSDARQLDQNLATAEGAVQQFMNSHSIMSLKRLSGWDLDNALLQSGNLSI
ALNSTYKPPVGAMLDEYCALSDVKIGREVISVSGPNRTIFAANLTLKNYPTNLTPGLM
ERLVASPLEFRLTHVMRCLGQAAAVKTLKEVSNYYFMNQSTFMQRAIAKATSSEPGVD
PGKADLYMESLEALRRQTVEGLGWLYHAMTVTVFGTSLNHLEQEVNEVGRNLSDVPFI
RERLGLKASFYSMIPGQWSMQQRLMLVNAEVAADCAPIYTIDQGSPKSQHFSETTGTY
QPSLCLFQTVYGTPYHYNPHVGQLGHTMLVMPSGNGKTTFANLCLAQFQRYPDAQVFI
FDRDFSCRIITGLVGGTHIDLKSGIKLNPMAAVNEGPMGRLWAREFLLQRLEESGTQV
TPEDRNVIDDTLLALSKTDQPISMGTVAGVLPRKLEAALAEWVNNGPYGMFDSTVDEL
SLESWTCIEMKDIMAVDRLARAFLDHAFRMIMKRLDGRPTFIYLEEASFLLNSPQFLR
AFDDWLKTFRKLNAFVWLTIQSPESVSGIDDERVRATIADNIPNLILGYNQRLENHRE
LYKSMFGMHDEQVNLLANLKPKRDYLLVADGICRVMGTNLSKDALAYLRSEMPYQDLF
TKAQESGRTDWRDFYIAEALKRS"
/locus_tag="Pnap_4228"
/locus_tag="Pnap_4228"
/note="KEGG: mlo:mll9607 conjugal transfer protein trbJ"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39511.1"
/db_xref="GI:"
/translation="MKLNIKKSLAIATIACAGFLPTFSQAMLVFDAANYSQTTITAIQ
QIKAQIDQVRQLQEQIKSNSANFAGKDIADLKREYDKVKRVYDSANALQNTLLGVQQN
FDNLKAMFGSGNYQDFGSMAVSIGDRAKAGDAVAKNLYDNSRRAQDQMKDAFDRHQKI
VDQASNVSGVTEATQATTAAVGVLIQQNNSMLAMMAADQTKKAVDASEINTEKQERAQ
AEMKYQQNMSSELKKILKK"
sig_peptide
/locus_tag="Pnap_4228"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.838 at
residue 27"
/locus_tag="Pnap_4229"
/locus_tag="Pnap_4229"
/note="KEGG: rme:Rmet_6307 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39512.1"
/db_xref="GI:"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR006034"
/translation="MRVLVHITIGFLLSLMACFSFAQDPVSIPAPVSAALAANTPAAV
KDSGNAQSLTVIQTVIENLFGKSNSGESLIKRFTGSGLTIAGSLTSTVALPLAGALAL
ASMLWHIMLAMANRKSPTDAAIEGILFAVLTAFLISQYASIVRDVVKFGDMVITATGG
TVGESVTNFMTGFLVKFIDVIVKGFSAFSITSWLTGSADMLFGVALMVLACFFAFTAM
IELVGVLLMGPVVVGLAIAIGPIFIACLASTFTRRWFNQWFNFLVGGAFLTAVTVIVL
KLLTEVVTAGVGAIGEGSVSGQALAMAMIAVGTAKIFAAIPNFADSILPGRTGAGQAV
TSGDGLGNSAVAVMGKAADPAKAALATAKAAANPGNALAQTSAAISNARTGGAVNNIR
SGVATAASAVRKALP"
sig_peptide
/locus_tag="Pnap_4229"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.995 at
residue 23"
/locus_tag="Pnap_4230"
/locus_tag="Pnap_4230"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39513.1"
/db_xref="GI:"
/translation="MTWLKKWKLSSTQTLVLAALAFGSLSAQAQSKIHCLYNADAARY
EAPLAWQNTLGAARANAMCSRVTGAVIPATPMMAASPVIAAAPVAPMAPAAAPPPERI
SAPAQPVYSISSGEKVSEVLTKWAAAQGYSLVWDAPGQSDLSLLTGTVEAQSLTEAVG
KLVTALNSKLAGKRSANNQETQFAFPVEAIAYSNNVIAVTVKQ"
sig_peptide
/locus_tag="Pnap_4230"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.996 at
residue 30"
/locus_tag="Pnap_4231"
/locus_tag="Pnap_4231"
/note="KEGG: bbr:BB3199 putative lipoprotein"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="ABM39514.1"
/db_xref="GI:"
/translation="MKTTIVLVALIATSGLSFSQVRFIDAPYPSSVSRPALQMPVAQQ
VAMPVYQATPVSAPAMQAGFEATPADANLRKALVRWTKMIGWTFEPEHWTLDRDIPIA
GSASLGSDFKMATRLLLSSTEMTDLPAQPCFYSNNVLRVIPLNELCSRQQVNKTQ"
sig_peptide
/locus_tag="Pnap_4231"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.995) with cleavage site probability 0.990 at
residue 20"
/locus_tag="Pnap_4232"
/locus_tag="Pnap_4232"
/note="KEGG: bbr:BB3198 lipoprotein"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="ABM39515.1"
/db_xref="GI:"
/translation="MRQHLLSLFVTAALATIALPGCGTYNGKQEIKQSLGETRQHIDA
MATASNSRARDMGINKFNGQDVGAPWIAGKSIPLSKEVSVPSQLRKNVRTTVLSSECA
NAVTLRVVANCITDATGLPVRVKADANLPIASFVPRASAGAGPAPAPATRPGEAGNSG
ANTTRVFTPEAADISLTRLLDTISAVYSVSYRLTNDSALEFYRLDTRTFRIKSLAQKL
TAKTTQSTGFDNNSITTFEIKEADAIDAIGKTITAMGTMAGSINVSHETKAVTVTDTP
EVLDSIARYLEEENKRLTRRVTLVVDQFYVSDKDNREFSLDWNLVYGALNVSSASRAP
TTLAPDTAGAFGAVANTGRFAGSGLLVKALSEQGLMVQQRSFPLSTQNGSPVSIGLPT
IFDYVSEVTLTQTNAGAVNSQTAPSVKQKEEKIGTYLTITPEAQDDGQVIISANFQDR
TGVLTPYTVQAGGNSSTIQQRNIDEVSNIVRTVVRVGVPTVIGGLSETVDNSKDRRLV
DGAPILLGGSDSLKKNRRSMILVVTAVAEDGV"
sig_peptide
/locus_tag="Pnap_4232"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 0.909) with cleavage site probability 0.602 at
residue 28"
/locus_tag="Pnap_4233"
/locus_tag="Pnap_4233"
/note="KEGG: bpe:BP1830 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39516.1"
/db_xref="GI:"
/translation="MSANNQLAEPVLLGDGSVAPPGVTIILGMTWKVLLGQKLGAMAV
QAAVLAKASHYTHTPNIGSVGYTNLKPGVKTTYISAAGIVASQKTMGDFLIGLALNET
DTWLCGVSNGSVVSGYDIVVNDALTFEKIVNAFKVRFEEAHLIGDVELGFAAEYGWDA
ISEGLASKEFRKNATIRPTSKGLSERFEAVPKKVLYIGGIALILLVGQRFIVPAISNV
FHKPKEIAVIDPSEAWKDALDEWVRAHPVSSQGSLNELLDALANQPLVVAGWQASAFD
CVWGQKSWQCTTKYSASKRSHTNQAFEAAKPKDWITTFTPMRDVQVRYDIAASAVKLD
VKSLKPVADYELITMSQLQQITPLIADSAAPMGTFVKVPVPEPKTNEGQPIALPADML
IPKVSMLKIIAPLRDIAAFQTWINDVAWTNVSLRIERGKQPSAKDSAITMELKGNFYA
/locus_tag="Pnap_4234"
/locus_tag="Pnap_4234"
/note="KEGG: tcr: mucin-associated surface
protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABM39517.1"
/db_xref="GI:"
/translation="MPKTNFFSHFALSLLGALSLHASAQNVPAVAGTALAASAAAASA
ARPAGAASGVAVARVSADTKRAEVSKQEGKGPVGTLSSAKTIRELLEIDDQIALSKER
KALADETKKTEKEPVANAPVNLTLAVTARKAAENKANAIKQANAVASSIKIDAIMGIQ
GERVINANIAGTQTWIRETNPTPIAGWLMVAVKGSCATFERNEASAPKAKKVRAAKGK
KLHQSNGVQTTEQTVCFKRPEAFLPPPAFGSSGGGAGAMPMPVPLPFPAPFSTPPRVA
sig_peptide
/locus_tag="Pnap_4234"
/note="Signal predicted by SignalP 2.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.906 at
residue 25"
/locus_tag="Pnap_4235"
/locus_tag="Pnap_4235"
/note="PFAM: type II secretion system protein E;
KEGG: bbr:BB3195 putative general secretion pathway
/codon_start=1
/transl_table=11
/product="type II secretion system protein E"
/protein_id="ABM39518.1"
/db_xref="GI:"
/db_xref="InterPro:IPR001482"
/translation="MAMVNLFRKLFLRPALVENQVIASDIAAAVNFRPRKPLKVSVAD
AMADSEDIPSNIEAFATSVASTNVQHGPFGKSISVETIKDFATLPLLFEGLVNDFQLG
SHLGYNVQPALFGGVQGSEAARIAILVNPLYANSDEVVELLSILANPKQHKHEFKLWE
HASRVIIPHSLMLSLSRGEIDKNSLSNRRKINSDPKKHSFYVALENIIQWGVRQNASD
VHFNLNFNEEHSEVRFTINGRYVAPQMWRMPTQTMFQILSVAWMSGTGGNGPSYDTRV
EQQCRIALKIDDKPIMLRWASASTESPGPSVTTRIIKSDA