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Also on January’s agenda: One of our favorite Philadelphia bands “Hectic Zeniths” has released their CD Digipak — YEAH!!! We learned about this group of musicians after they sent us their music, which is simply beautiful. Order the Digipak @
I hope you’ll enjoy it as much as we do.
Hectic Zeniths – Then and Now:
Then on January 19, Edie_n_Cincy will be in Louisville, Kentucky for the long-awaited “Little People” aka Laurent Clerc show. After Clerc’s first U.S. tour was a success, he’s come back to the States. This time he’s touring with west coast DJ “Emancipator”
— I CAN HARDLY WAIT!!!
little people – Start Shootin':
Emancipator – Nevergreen:
little people – Inutile et Indispensable:
*January 9, 1990: Happy 22nd Birthday to my girl NANTUCKET — may the stars always shine brightly on you!!!
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Query sequences
TEXT DATA , Please paste your sequences (FASTA format)
FILE UPLOAD(FASTA format)
Enable Sequence Cleaning Process
number of CPUs
minimum percent identity for an alignemnt with a contaminant
Enable Repeat Masking Process
number of CPUs
Repeats Library
Using your custom repeats library
Using EGrep repeats library
(Our custom repeats library)
Using RepBase repeats library
Arabidopsis
Drosophila
Using TREP repeats library
Nonredundant
Complete Set
Using TIGR repeats library
Arabidopsis
Arabidopsis_GSS
Brassica_GSS
Glycine_GSS
Lycopersicon
Lycopersicon_GSS
Medicago_GSS
Sorghum_GSS
Triticum_GSS
Enable Vector Masking Process
number of CPUs
Vector Library
Using your custom vector library
Using EGvec vector library
(Our custom vectors library)
Using NCBI's vector library
Using EMBL vector library
Enable Organelle Masking Process
number of CPUs
Organelle Library
Using your custom organelle library
Using Plastids library
Adiantum capillus-veneris
Amborella trichopoda
Anthoceros formosae
Arabidopsis thaliana
Atropa belladonna
Calycanthus floridus var. glaucus
Chaetosphaeridium globosum
Chlamydomonas reinhardtii
Chlorella vulgaris
Cucumis sativus
Cyanidioschyzon merolae
Cyanidium caldarium
Cyanophora paradoxa
Eimeria tenella
Epifagus virginiana
Eucalyptus globulus subsp. globulus
Euglena gracilis
Euglena longa
Gracilaria tenuistipitata var. liui
Guillardia theta
Huperzia lucidula
Lotus japonicus
Marchantia polymorpha
Medicago truncatula
Mesostigma viride
Nephroselmis olivacea
Nicotiana tabacum
Nymphaea alba
Odontella sinensis
Oenothera elata subsp. hookeri
Oryza nivara
Oryza sativa (japonica cultivar-group)
Panax ginseng
Physcomitrella patens subsp. patens
Pinus koraiensis
Pinus thunbergii
Porphyra purpurea
Psilotum nudum
Saccharum hybrid cultivar SP-80-3280
Saccharum officinarum
Spinacia oleracea
Toxoplasma gondii
Triticum aestivum
Using Mitochondria library
Enable Sequence Assembly Process
overlap percent identity cutoff N & 65
Reference:
Masoudi-Nejad A, Tonomura K, Kawashima S, Moriya Y, Suzuki M, Itoh M, Kanehisa M, Endo T, Goto S (2006)
EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments.
Nucleic Acids Res. 34:W459-462.